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I0JS40 (I0JS40_HALH3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length208 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 RuleBase RU000544 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. SAAS SAAS020633 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020633 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding17 – 248ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding90 – 934ATP By similarity HAMAP-Rule MF_00124

Sites

Active site911Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1471Zinc By similarity HAMAP-Rule MF_00124
Metal binding1501Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
I0JS40 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: ACCCED8E6CB223DE

FASTA20823,301
        10         20         30         40         50         60 
MDVYVMKQSG WVEVICGSMF SGKSEELIRR VRRATFGNLT VRVYKPAVDD RYKEDAVVSH 

        70         80         90        100        110        120 
NGTSVLARPM KESLDILNDV GEEVDIVGID EVQFFDEHIV EVAECLADRG IRVITAGLDT 

       130        140        150        160        170        180 
DFRGEPFGKM PEMMALSESI TKLNAICPIC GSPASRTQRL IDGKPASYHD PIILVGASES 

       190        200 
YEPRCRHHHE VPHKPRQQQV KAAYAERK 

« Hide

References

[1]"Chloride and organic osmolytes: a hybrid strategy to cope with elevated salinities by the moderately halophilic, chloride-dependent bacterium Halobacillus halophilus."
Saum S.H., Pfeiffer F., Palm P., Rampp M., Schuster S.C., Muller V., Oesterhelt D.
Environ. Microbiol. 15:1619-1633(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE717023 Genomic DNA. Translation: CCG46961.1.
RefSeqYP_006182233.1. NC_017668.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG46961; CCG46961; HBHAL_4623.
GeneID12746309.
KEGGhhd:HBHAL_4623.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycHHAL866895:GLDT-3660-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0JS40_HALH3
AccessionPrimary (citable) accession number: I0JS40
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)