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Protein
Submitted name:

Putative ribulose-bisphosphate carboxylase-like protein

Gene

LFE_2466

Organism
Leptospirillum ferrooxidans (strain C2-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLFER1162668:GLFM-2462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribulose-bisphosphate carboxylase-like proteinImported
Gene namesi
Ordered Locus Names:LFE_2466Imported
OrganismiLeptospirillum ferrooxidans (strain C2-3)Imported
Taxonomic identifieri1162668 [NCBI]
Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum
ProteomesiUP000007382: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI0IS88.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

I0IS88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEMIRATYA IASNDLPRAA ALIAREMSVG VKKTRYENSK TGGFMATVDT
60 70 80 90 100
IKKVGSRGII TIDVPSANIS TVYGLLLSIA GEISCLKILK SIELLDFDLP
110 120 130 140 150
KALADRLPGP AFGLSGIKKR RGNLDRPLFI TVIKPSQGLT PEEYAHIAYE
160 170 180 190 200
SLVGGMDAIK SDELLQESDK NWTARFEAAV AAARRAEKET GEPKNVMMHP
210 220 230 240 250
VDTPMKMVDR FSRGANMGCD LAMLSPAASG FPMLEELARM ERFPIMAHMA
260 270 280 290 300
MSGWLWQKNG MSVRAWSKFM RLAGADIVLY PALKGTLKAT RSELLEVMDA
310 320 330 340 350
VKTPLGTRKE SLIAVGGGMH AGTMKVHYDL FGPDFAYLCG GGVCGHPDGA
360 370 380 390
RAGGKSIRQA WDAISQGIPL SRYRKDHPEL DAALTAFTRY V
Length:391
Mass (Da):42,488
Last modified:June 13, 2012 - v1
Checksum:iDBA3B34055CAE460
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012342 Genomic DNA. Translation: BAM08137.1.
RefSeqiWP_014450620.1. NC_017094.1.
YP_005470267.1. NC_017094.1.

Genome annotation databases

EnsemblBacteriaiBAM08137; BAM08137; LFE_2466.
GeneIDi12054804.
KEGGilfc:LFE_2466.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012342 Genomic DNA. Translation: BAM08137.1.
RefSeqiWP_014450620.1. NC_017094.1.
YP_005470267.1. NC_017094.1.

3D structure databases

ProteinModelPortaliI0IS88.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAM08137; BAM08137; LFE_2466.
GeneIDi12054804.
KEGGilfc:LFE_2466.

Phylogenomic databases

KOiK01601.

Enzyme and pathway databases

BioCyciLFER1162668:GLFM-2462-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the pioneer microbe on fresh volcanic deposit, Leptospirillum ferrooxidans strain C2-3."
    Fujimura R., Sato Y., Nishizawa T., Nanba K., Oshima K., Hattori M., Kamijo T., Ohta H.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C2-3Imported.

Entry informationi

Entry nameiI0IS88_LEPFC
AccessioniPrimary (citable) accession number: I0IS88
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: January 7, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.