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I0IS88 (I0IS88_LEPFC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LFE_2466 EMBL BAM08137.1
OrganismLeptospirillum ferrooxidans (strain C2-3) [Complete proteome] [HAMAP] EMBL BAM08137.1
Taxonomic identifier1162668 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I0IS88 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: DBA3B34055CAE460

FASTA39142,488
        10         20         30         40         50         60 
MSEMIRATYA IASNDLPRAA ALIAREMSVG VKKTRYENSK TGGFMATVDT IKKVGSRGII 

        70         80         90        100        110        120 
TIDVPSANIS TVYGLLLSIA GEISCLKILK SIELLDFDLP KALADRLPGP AFGLSGIKKR 

       130        140        150        160        170        180 
RGNLDRPLFI TVIKPSQGLT PEEYAHIAYE SLVGGMDAIK SDELLQESDK NWTARFEAAV 

       190        200        210        220        230        240 
AAARRAEKET GEPKNVMMHP VDTPMKMVDR FSRGANMGCD LAMLSPAASG FPMLEELARM 

       250        260        270        280        290        300 
ERFPIMAHMA MSGWLWQKNG MSVRAWSKFM RLAGADIVLY PALKGTLKAT RSELLEVMDA 

       310        320        330        340        350        360 
VKTPLGTRKE SLIAVGGGMH AGTMKVHYDL FGPDFAYLCG GGVCGHPDGA RAGGKSIRQA 

       370        380        390 
WDAISQGIPL SRYRKDHPEL DAALTAFTRY V 

« Hide

References

[1]"The complete genome sequence of the pioneer microbe on fresh volcanic deposit, Leptospirillum ferrooxidans strain C2-3."
Fujimura R., Sato Y., Nishizawa T., Nanba K., Oshima K., Hattori M., Kamijo T., Ohta H.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C2-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012342 Genomic DNA. Translation: BAM08137.1.
RefSeqYP_005470267.1. NC_017094.1.

3D structure databases

ProteinModelPortalI0IS88.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAM08137; BAM08137; LFE_2466.
GeneID12054804.
KEGGlfc:LFE_2466.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycLFER1162668:GLFM-2462-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0IS88_LEPFC
AccessionPrimary (citable) accession number: I0IS88
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)