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I0IN05 (I0IN05_LEPFC) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LFE_0950 EMBL BAM06654.1
OrganismLeptospirillum ferrooxidans (strain C2-3) [Complete proteome] [HAMAP] EMBL BAM06654.1
Taxonomic identifier1162668 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I0IN05 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: BD3EE5D8B4F27512

FASTA45751,956
        10         20         30         40         50         60 
MLTRRHHAKK NEEFLTPTYG TRFFTNDLEA FRMSEKGTNP QSAYQIIHDE LDLDGNPSLN 

        70         80         90        100        110        120 
LASFVTTWME PEAQKLISEN LQKNLVDQSE YPQTGQIQHR VIHMLASLFH APEDQDVTGT 

       130        140        150        160        170        180 
STIGSSEAIL LGLLAHKKKW QFNRKKKGLS TEFPNLVVGG DVHVVWEKFC RYFDVELRIV 

       190        200        210        220        230        240 
PLSRNRFILD VNEALSMVDE NTIAVGAVLG TTFTGQMDPI EALNESLEKR YREKGYFVPI 

       250        260        270        280        290        300 
HVDGASGGFL LPFLEPEFVW DFRLSHVRSI NVSGHKFGLV YPGVGWLLFR DRSDLPDDLV 

       310        320        330        340        350        360 
FRVNYLGAEE ETYTLNFSSN AAFVIAQYYN LLRLGKQGYR QILNNCLDNA RFFAGKLEKS 

       370        380        390        400        410        420 
SFFVPIDPNP SLPIVAFSLR SPHGGREMEI SAELKKFGWI VPAYTLPPKA ETISVLRVVV 

       430        440        450 
REQVSRNMLE HLLEHLDISS RILKNPSLQT HESPPVC 

« Hide

References

[1]"The complete genome sequence of the pioneer microbe on fresh volcanic deposit, Leptospirillum ferrooxidans strain C2-3."
Fujimura R., Sato Y., Nishizawa T., Nanba K., Oshima K., Hattori M., Kamijo T., Ohta H.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C2-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012342 Genomic DNA. Translation: BAM06654.1.
RefSeqYP_005468784.1. NC_017094.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAM06654; BAM06654; LFE_0950.
GeneID12055757.
KEGGlfc:LFE_0950.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycLFER1162668:GLFM-947-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0IN05_LEPFC
AccessionPrimary (citable) accession number: I0IN05
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: December 11, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)