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I0IN05

- I0IN05_LEPFC

UniProt

I0IN05 - I0IN05_LEPFC

Protein

Glutamate decarboxylase

Gene

LFE_0950

Organism
Leptospirillum ferrooxidans (strain C2-3)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciLFER1162668:GLFM-947-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:LFE_0950Imported
    OrganismiLeptospirillum ferrooxidans (strain C2-3)Imported
    Taxonomic identifieri1162668 [NCBI]
    Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeLeptospirillum
    ProteomesiUP000007382: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I0IN05-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLTRRHHAKK NEEFLTPTYG TRFFTNDLEA FRMSEKGTNP QSAYQIIHDE    50
    LDLDGNPSLN LASFVTTWME PEAQKLISEN LQKNLVDQSE YPQTGQIQHR 100
    VIHMLASLFH APEDQDVTGT STIGSSEAIL LGLLAHKKKW QFNRKKKGLS 150
    TEFPNLVVGG DVHVVWEKFC RYFDVELRIV PLSRNRFILD VNEALSMVDE 200
    NTIAVGAVLG TTFTGQMDPI EALNESLEKR YREKGYFVPI HVDGASGGFL 250
    LPFLEPEFVW DFRLSHVRSI NVSGHKFGLV YPGVGWLLFR DRSDLPDDLV 300
    FRVNYLGAEE ETYTLNFSSN AAFVIAQYYN LLRLGKQGYR QILNNCLDNA 350
    RFFAGKLEKS SFFVPIDPNP SLPIVAFSLR SPHGGREMEI SAELKKFGWI 400
    VPAYTLPPKA ETISVLRVVV REQVSRNMLE HLLEHLDISS RILKNPSLQT 450
    HESPPVC 457
    Length:457
    Mass (Da):51,956
    Last modified:June 13, 2012 - v1
    Checksum:iBD3EE5D8B4F27512
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012342 Genomic DNA. Translation: BAM06654.1.
    RefSeqiWP_014449145.1. NC_017094.1.
    YP_005468784.1. NC_017094.1.

    Genome annotation databases

    EnsemblBacteriaiBAM06654; BAM06654; LFE_0950.
    GeneIDi12055757.
    KEGGilfc:LFE_0950.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012342 Genomic DNA. Translation: BAM06654.1 .
    RefSeqi WP_014449145.1. NC_017094.1.
    YP_005468784.1. NC_017094.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAM06654 ; BAM06654 ; LFE_0950 .
    GeneIDi 12055757.
    KEGGi lfc:LFE_0950.

    Phylogenomic databases

    KOi K01580.

    Enzyme and pathway databases

    BioCyci LFER1162668:GLFM-947-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the pioneer microbe on fresh volcanic deposit, Leptospirillum ferrooxidans strain C2-3."
      Fujimura R., Sato Y., Nishizawa T., Nanba K., Oshima K., Hattori M., Kamijo T., Ohta H.
      Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C2-3Imported.

    Entry informationi

    Entry nameiI0IN05_LEPFC
    AccessioniPrimary (citable) accession number: I0IN05
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3