I0IJ73 (I0IJ73_PHYMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isocitrate dehydrogenase EMBL BAM05311.1
EC=1.1.1.42 EMBL BAM05311.1

Gene names

Name:	icd EMBL BAM05311.1
Ordered Locus Names:	PSMK_31520 EMBL BAM05311.1

Organism

Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) [Complete proteome] [HAMAP] EMBL BAM05311.1

Taxonomic identifier

1142394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Phycisphaerae › Phycisphaerales › Phycisphaeraceae › Phycisphaera › Phycisphaera mikurensis

Protein attributes

Sequence length	479 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004444 EMBL BAM05311.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glyoxylate cycle Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I0IJ73 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: 198092E781DCB762	FASTA	479	51,658
	10 20 30 40 50 60 MAVAHGDGIG PEIMDATLRV LDAAGAGLVY DTIEIGKKVY ERGVSAGIEA SSWDTLRKHR 70 80 90 100 110 120 VFLKAPITTP QGGGYKSLNV TTRKTLGLYA NVRPCVAYAP FVGSRHPGMD VVIVRENEED 130 140 150 160 170 180 TYGGIEHRQT AEVTQCLKLI SRPGCEKIVR HAFEYARAAG RKRVSCFTKD NIMKATDGLF 190 200 210 220 230 240 HRVFDEIRGE YPEIESDHWI IDIGAAMLAD RPERFDVILT LNLYGDVLSD IAAQIAGSVG 250 260 270 280 290 300 LCGTSNIGDT CSMFEAIHGS APDIAGRDVA NPTGLLLAAV QMLVHLNKPG AAEKIHNAVL 310 320 330 340 350 360 RTIEDGVHTA DLHDGRGHDP VGTRAFADAV IQRLGQRPEH LPAAVYAGVA DRAAPGVGPA 370 380 390 400 410 420 TREKPVKALV GVDVFLDWDP AERDPDALAA ELHAAADGQP LQLQMITNRG VKVWPEGFPE 430 440 450 460 470 TFCTDHWRCR FVPRGGGEAS HRQVLGLLTR LADAGLDFIK TEHLCTFDGE AGFSLGQGQ

References

[1]

"Complete genome sequence of Phycisphaera mikurensis NBRC 102666." Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBRC 102666 / KCTC 22515 / FYK2301M01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012338 Genomic DNA. Translation: BAM05311.1.
RefSeq	YP_005447208.1. NC_017080.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAM05311; BAM05311; PSMK_31520.
GeneID	12036986.
KEGG	phm:PSMK_31520.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00031.
Enzyme and pathway databases
BioCyc	PMIK1142394:GLIF-3201-MONOMER.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR019818. IsoCit/isopropylmalate_DH_CS. IPR001804. Isocitrate/isopropylmalate_DH. IPR014273. Isocitrate_DH_aproteobac-typ. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
TIGRFAMs	TIGR02924. ICDH_alpha. 1 hit.
PROSITE	PS00470. IDH_IMDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I0IJ73_PHYMF

Accession

Primary (citable) accession number: I0IJ73

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	May 29, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)