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I0IDH9

- I0IDH9_PHYMF

UniProt

I0IDH9 - I0IDH9_PHYMF

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Protein
Superoxide dismutase
Gene
sodA, PSMK_11580
Organism
Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciPMIK1142394:GLIF-1176-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:PSMK_11580Imported
OrganismiPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)Imported
Taxonomic identifieri1142394 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPhycisphaeraePhycisphaeralesPhycisphaeraceaePhycisphaera
ProteomesiUP000007881: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI0IDH9.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0IDH9-1 [UniParc]FASTAAdd to Basket

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MAFSLPSLTY AYDALEPAID ARTMEVHYSK HFAGYASKLT AALEGTEWAD    50
RSVEEILAKL DQLPEGKQTA VRNNGGGYFN HDLFFTTLKA PSENNAPSGE 100
LAEAIERDFG GFADFKKSFS DAAASRFGSG WAWLCVQPGG KLHVTSTANQ 150
DTTFMPPAFG GHGEGHHPVL GLDVWEHAYY LHYQNRRPDY IEAFFSVIDW 200
DKVGEKHAAA KG 212
Length:212
Mass (Da):23,337
Last modified:June 13, 2012 - v1
Checksum:i66147593B98864FC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012338 Genomic DNA. Translation: BAM03317.1.
RefSeqiYP_005445214.1. NC_017080.1.

Genome annotation databases

EnsemblBacteriaiBAM03317; BAM03317; PSMK_11580.
GeneIDi12037654.
KEGGiphm:PSMK_11580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012338 Genomic DNA. Translation: BAM03317.1 .
RefSeqi YP_005445214.1. NC_017080.1.

3D structure databases

ProteinModelPortali I0IDH9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAM03317 ; BAM03317 ; PSMK_11580 .
GeneIDi 12037654.
KEGGi phm:PSMK_11580.

Phylogenomic databases

KOi K04564.

Enzyme and pathway databases

BioCyci PMIK1142394:GLIF-1176-MONOMER.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Phycisphaera mikurensis NBRC 102666."
    Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 102666 / KCTC 22515 / FYK2301M01.

Entry informationi

Entry nameiI0IDH9_PHYMF
AccessioniPrimary (citable) accession number: I0IDH9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: July 9, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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