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I0IDH9

- I0IDH9_PHYMF

UniProt

I0IDH9 - I0IDH9_PHYMF

Protein

Superoxide dismutase

Gene

sodA

Organism
Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciPMIK1142394:GLIF-1176-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:PSMK_11580Imported
    OrganismiPhycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)Imported
    Taxonomic identifieri1142394 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPhycisphaeraePhycisphaeralesPhycisphaeraceaePhycisphaera
    ProteomesiUP000007881: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliI0IDH9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04564.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0IDH9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFSLPSLTY AYDALEPAID ARTMEVHYSK HFAGYASKLT AALEGTEWAD    50
    RSVEEILAKL DQLPEGKQTA VRNNGGGYFN HDLFFTTLKA PSENNAPSGE 100
    LAEAIERDFG GFADFKKSFS DAAASRFGSG WAWLCVQPGG KLHVTSTANQ 150
    DTTFMPPAFG GHGEGHHPVL GLDVWEHAYY LHYQNRRPDY IEAFFSVIDW 200
    DKVGEKHAAA KG 212
    Length:212
    Mass (Da):23,337
    Last modified:June 13, 2012 - v1
    Checksum:i66147593B98864FC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012338 Genomic DNA. Translation: BAM03317.1.
    RefSeqiYP_005445214.1. NC_017080.1.

    Genome annotation databases

    EnsemblBacteriaiBAM03317; BAM03317; PSMK_11580.
    GeneIDi12037654.
    KEGGiphm:PSMK_11580.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012338 Genomic DNA. Translation: BAM03317.1 .
    RefSeqi YP_005445214.1. NC_017080.1.

    3D structure databases

    ProteinModelPortali I0IDH9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAM03317 ; BAM03317 ; PSMK_11580 .
    GeneIDi 12037654.
    KEGGi phm:PSMK_11580.

    Phylogenomic databases

    KOi K04564.

    Enzyme and pathway databases

    BioCyci PMIK1142394:GLIF-1176-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Phycisphaera mikurensis NBRC 102666."
      Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.
      Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 102666 / KCTC 22515 / FYK2301M01Imported.

    Entry informationi

    Entry nameiI0IDH9_PHYMF
    AccessioniPrimary (citable) accession number: I0IDH9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3