I0IDH9 (I0IDH9_PHYMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL BAM03317.1
Ordered Locus Names:	PSMK_11580 EMBL BAM03317.1

Organism

Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) [Complete proteome] [HAMAP] EMBL BAM03317.1

Taxonomic identifier

1142394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Phycisphaerae › Phycisphaerales › Phycisphaeraceae › Phycisphaera › Phycisphaera mikurensis

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL BAM03317.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I0IDH9 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: 66147593B98864FC	FASTA	212	23,337
	10 20 30 40 50 60 MAFSLPSLTY AYDALEPAID ARTMEVHYSK HFAGYASKLT AALEGTEWAD RSVEEILAKL 70 80 90 100 110 120 DQLPEGKQTA VRNNGGGYFN HDLFFTTLKA PSENNAPSGE LAEAIERDFG GFADFKKSFS 130 140 150 160 170 180 DAAASRFGSG WAWLCVQPGG KLHVTSTANQ DTTFMPPAFG GHGEGHHPVL GLDVWEHAYY 190 200 210 LHYQNRRPDY IEAFFSVIDW DKVGEKHAAA KG

References

[1]

"Complete genome sequence of Phycisphaera mikurensis NBRC 102666." Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBRC 102666 / KCTC 22515 / FYK2301M01.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012338 Genomic DNA. Translation: BAM03317.1.
RefSeq	YP_005445214.1. NC_017080.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAM03317; BAM03317; PSMK_11580.
GeneID	12037654.
KEGG	phm:PSMK_11580.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04564.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I0IDH9_PHYMF

Accession

Primary (citable) accession number: I0IDH9

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)