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I0IDA2 (I0IDA2_PHYMF) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length581 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I0IDA2 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: C0F34491458A4EA0

FASTA58163,484
        10         20         30         40         50         60 
MKSFTALFTA VDRTTRTSEK TAAIAAYFRE ADADDAAWAL AVLTGTSLIR RVPYNRLRAF 

        70         80         90        100        110        120 
CGEATGLPAW LIAESHSVVG DLSETLSLLL PPPTAAGEDE SLTSIIETRV LPLERMSEGQ 

       130        140        150        160        170        180 
QRTAILATWN RLDATQRLVF HKLISGNFRF GAAKKVVINA LAEATGVPAA VMQHRMTGGF 

       190        200        210        220        230        240 
SPTRSAWERV TAPDRPGGQA AGSGGSGGGA DADAAADDAA RPYPFCLAQQ LQATPREKLG 

       250        260        270        280        290        300 
DRSDWSVEWK WDGIRCQLLR RGGSARLWSR GEELITGTFP EVAAAASTLP EGTVLDGEIL 

       310        320        330        340        350        360 
AWRNADGSAD RHAFELQTPT VRGLPEPFAV LQRRLNRRAR HPALFEDRPV VFMAYDVLEL 

       370        380        390        400        410        420 
GGADLRTEPT HQRRAALEAL AADAFHASGG KLLLSPAVEG GSWDSLGALR ASSRARNVEG 

       430        440        450        460        470        480 
FMLKRRDAPY GIGRAMTRES GDERGLWWKW KVDPYAIDAV MIYAQRGTGR RSTLYTDYTF 

       490        500        510        520        530        540 
ALWTGEQPGR GELVPVTKAY SGLTDAEFAR VDAFIKGHRR GGRGAFCEVE PSRVFEIAFD 

       550        560        570        580 
GVQESKRHRS GLALRFPRMA RIRDDKRADE ADTVGFLRGL I 

« Hide

References

[1]"Complete genome sequence of Phycisphaera mikurensis NBRC 102666."
Ankai A., Hosoyama A., Terui Y., Sekine M., Fukai R., Kato Y., Nakamura S., Yamada-Narita S., Kawakoshi A., Fukunaga Y., Yamazaki S., Fujita N.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBRC 102666 / KCTC 22515 / FYK2301M01.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012338 Genomic DNA. Translation: BAM03240.1.
RefSeqYP_005445137.1. NC_017080.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAM03240; BAM03240; PSMK_10810.
GeneID12037576.
KEGGphm:PSMK_10810.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPMIK1142394:GLIF-1098-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0IDA2_PHYMF
AccessionPrimary (citable) accession number: I0IDA2
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)