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I0HVF0

- I0HVF0_RUBGI

UniProt

I0HVF0 - I0HVF0_RUBGI

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641UniRule annotation
Active sitei592 – 5921UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-3700-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:RGE_36480Imported
OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
Taxonomic identifieri983917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
ProteomesiUP000007883: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0HVF0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPRRPSTAAA PRKTSPHQSA ADAAEKNRPL VEDIRLLGRI LGDVIREQEG
60 70 80 90 100
TEAYELIERV RQLSVAYRLK ADASAGRVLD RLLKNLSADQ TVSVIRAFSY
110 120 130 140 150
FSHLANIAED RHHVRRRRVH EREGHLQEGS LAMAIDRLHA ADHHNADIAR
160 170 180 190 200
MLDGAYLSPV LTAHPTEVQR KSILDAERAV AELIGQRDEQ LTEDQRRENE
210 220 230 240 250
ELLRARVTQL WQTRMLRTAK LTVADEIENA LGYYPSTFLR EIPRLYRELE
260 270 280 290 300
RALPGHPVAP FLRMGHWIGG DRDGNPNVDA STMRRALARQ GETALRFYLD
310 320 330 340 350
EVHALGVELS TSAMLAPVTP AMQALAERSP DRSVHREDEP YRRALIGLYA
360 370 380 390 400
RLAATLQALT GAAAPRTAVA PQPPYADAAE FLADLRIIEA SLRHHHAQAL
410 420 430 440 450
IAPRLAPLMR AVQVFGFHLA TLDLRQSSDK HEAVVAELLR VARLEPDYAA
460 470 480 490 500
LDEPARRALL LRLLDDARPL RVRGAEYSAL ATSELEVFET AREGRERYGR
510 520 530 540 550
EALRHYIISH TEDVSDLFEV LLLQKEAGLL RGTLDRDATA DLIVVPLFET
560 570 580 590 600
IGDLRQAAAI MRAYYALPGI TAMVVRSGAE QDVMLGYSDS NKDGGFFTSN
610 620 630 640 650
WELYRTEVAL GEFFATLHRE HGIRMRLFHG RGGTVGRGGG PSYQAILAQP
660 670 680 690 700
PGTVNGQIRL TEQGEVIGSK YANPEIGRRN LETLVAATLE ATLLHPTKSA
710 720 730 740 750
PKTFLDAAAR LSDASFAAYR ALVYETPGFV DWFFAATPIR EIAELNIGSR
760 770 780 790 800
PASRKATRAI EDLRAIPWSF SWGQCRLALP GWYGFGSAVE AFLGDETTQP
810 820 830 840 850
ARLELLQRMY RQWPFFRTLL SNLDMVLAKT DLRIAARYVE LVEDKRAAKR
860 870 880 890 900
VFTTIRAEWE RVGRALEQIT GEASRLQSNP TLARSIEHRF PYLDPLNHLQ
910 920 930 940
VELMRRFRQR KPDAAADDPA VARLQRGIHI SINGVAAGLR NTG
Length:943
Mass (Da):105,474
Last modified:June 13, 2012 - v1
Checksum:iF6CC8A9C65D37E47
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL96987.1.
RefSeqiWP_014429843.1. NC_017075.1.
YP_005438486.1. NC_017075.1.

Genome annotation databases

EnsemblBacteriaiBAL96987; BAL96987; RGE_36480.
GeneIDi12027790.
KEGGirge:RGE_36480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL96987.1 .
RefSeqi WP_014429843.1. NC_017075.1.
YP_005438486.1. NC_017075.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL96987 ; BAL96987 ; RGE_36480 .
GeneIDi 12027790.
KEGGi rge:RGE_36480.

Phylogenomic databases

KOi K01595.

Enzyme and pathway databases

BioCyci RGEL983917:GLJR-3700-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
    Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 100245 / IL144Imported.

Entry informationi

Entry nameiI0HVF0_RUBGI
AccessioniPrimary (citable) accession number: I0HVF0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3