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I0HVF0

- I0HVF0_RUBGI

UniProt

I0HVF0 - I0HVF0_RUBGI

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei164 – 1641UniRule annotation
    Active sitei592 – 5921UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciRGEL983917:GLJR-3700-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    Ordered Locus Names:RGE_36480Imported
    OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
    Taxonomic identifieri983917 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
    ProteomesiUP000007883: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0HVF0-1 [UniParc]FASTAAdd to Basket

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    MPRRPSTAAA PRKTSPHQSA ADAAEKNRPL VEDIRLLGRI LGDVIREQEG    50
    TEAYELIERV RQLSVAYRLK ADASAGRVLD RLLKNLSADQ TVSVIRAFSY 100
    FSHLANIAED RHHVRRRRVH EREGHLQEGS LAMAIDRLHA ADHHNADIAR 150
    MLDGAYLSPV LTAHPTEVQR KSILDAERAV AELIGQRDEQ LTEDQRRENE 200
    ELLRARVTQL WQTRMLRTAK LTVADEIENA LGYYPSTFLR EIPRLYRELE 250
    RALPGHPVAP FLRMGHWIGG DRDGNPNVDA STMRRALARQ GETALRFYLD 300
    EVHALGVELS TSAMLAPVTP AMQALAERSP DRSVHREDEP YRRALIGLYA 350
    RLAATLQALT GAAAPRTAVA PQPPYADAAE FLADLRIIEA SLRHHHAQAL 400
    IAPRLAPLMR AVQVFGFHLA TLDLRQSSDK HEAVVAELLR VARLEPDYAA 450
    LDEPARRALL LRLLDDARPL RVRGAEYSAL ATSELEVFET AREGRERYGR 500
    EALRHYIISH TEDVSDLFEV LLLQKEAGLL RGTLDRDATA DLIVVPLFET 550
    IGDLRQAAAI MRAYYALPGI TAMVVRSGAE QDVMLGYSDS NKDGGFFTSN 600
    WELYRTEVAL GEFFATLHRE HGIRMRLFHG RGGTVGRGGG PSYQAILAQP 650
    PGTVNGQIRL TEQGEVIGSK YANPEIGRRN LETLVAATLE ATLLHPTKSA 700
    PKTFLDAAAR LSDASFAAYR ALVYETPGFV DWFFAATPIR EIAELNIGSR 750
    PASRKATRAI EDLRAIPWSF SWGQCRLALP GWYGFGSAVE AFLGDETTQP 800
    ARLELLQRMY RQWPFFRTLL SNLDMVLAKT DLRIAARYVE LVEDKRAAKR 850
    VFTTIRAEWE RVGRALEQIT GEASRLQSNP TLARSIEHRF PYLDPLNHLQ 900
    VELMRRFRQR KPDAAADDPA VARLQRGIHI SINGVAAGLR NTG 943
    Length:943
    Mass (Da):105,474
    Last modified:June 13, 2012 - v1
    Checksum:iF6CC8A9C65D37E47
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012320 Genomic DNA. Translation: BAL96987.1.
    RefSeqiYP_005438486.1. NC_017075.1.

    Genome annotation databases

    EnsemblBacteriaiBAL96987; BAL96987; RGE_36480.
    GeneIDi12027790.
    KEGGirge:RGE_36480.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012320 Genomic DNA. Translation: BAL96987.1 .
    RefSeqi YP_005438486.1. NC_017075.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL96987 ; BAL96987 ; RGE_36480 .
    GeneIDi 12027790.
    KEGGi rge:RGE_36480.

    Phylogenomic databases

    KOi K01595.

    Enzyme and pathway databases

    BioCyci RGEL983917:GLJR-3700-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
      Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
      Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 100245 / IL144Imported.

    Entry informationi

    Entry nameiI0HVF0_RUBGI
    AccessioniPrimary (citable) accession number: I0HVF0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3