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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbL

Gene

cbbL

Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-3646-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbLImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbLImported
Ordered Locus Names:RGE_36060Imported
OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
Taxonomic identifieri983917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
Proteomesi
  • UP000007883 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 153121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini164 – 470307RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiQACDAYL.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0HVA8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKPHEPGAT GDQILDKKQR YSAGVLKYRQ MGYWDSDYVP KATDVVCLFR
60 70 80 90 100
ITPQEGVDPI EAAAAVAGES STATWTVVWT DRLTACDSYR AKAYKVEPVP
110 120 130 140 150
GRPGEYFAWV AYDLILFEEG SIANMTASLI GNVFSFKPLK AARLEDIQIP
160 170 180 190 200
VAYVKTFKGP PTGLIVERER LDKFGRPLLG ATTKPKLGLS GRNYGRVIYE
210 220 230 240 250
GLKGGLDFMK DDENINSQPF MHWRDRFLYV MDGVNKASAA TGEVKGSYLN
260 270 280 290 300
VTGATMEDIY ERAEFAKELG SVVIMVDLII GWSAIQSIAN WARKNDMIVH
310 320 330 340 350
MHRAGHGTYT RQKNHGVSFR VMAKWLRLAG VDHLHTGTAV GKLEGDPLTV
360 370 380 390 400
QGYYNVCRDA YTKQDLPRGL FFDQDWADLR KVMPVASGGI HAGQMHQLID
410 420 430 440 450
LFGDDVILQF GGGTIGHPAG IQAGAVANRV ALEAMVKARN EGRDIKNEGP
460 470 480 490
EILQKAAQFC TPLKQALDTW KDVSFNYAST DQSDYAVTPA TSA
Length:493
Mass (Da):54,372
Last modified:June 13, 2012 - v1
Checksum:i780F4633E7415C06
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012320 Genomic DNA. Translation: BAL96945.1.
RefSeqiWP_014429802.1. NC_017075.1.

Genome annotation databases

EnsemblBacteriaiBAL96945; BAL96945; RGE_36060.
KEGGirge:RGE_36060.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012320 Genomic DNA. Translation: BAL96945.1.
RefSeqiWP_014429802.1. NC_017075.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL96945; BAL96945; RGE_36060.
KEGGirge:RGE_36060.

Phylogenomic databases

KOiK01601.
OMAiQACDAYL.

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-3646-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
    Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 100245 / IL144Imported.

Entry informationi

Entry nameiI0HVA8_RUBGI
AccessioniPrimary (citable) accession number: I0HVA8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 13, 2016
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.