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I0HU03 (I0HU03_RUBGI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
I0HU03 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 382C2AF5702F3108

FASTA45047,785
        10         20         30         40         50         60 
MNPAPDASEG DLNLGRARQD WQARHLDEPT RALLAEDARW FFHQALSTPC LNALESAGGG 

        70         80         90        100        110        120 
WLTDTAGRRV LDLHGNSLHQ VGHGHPRVVA AITETLATLP FSPRRYTNRP AVELARRLCG 

       130        140        150        160        170        180 
LAPMPDAKLL LAPGGTAAIG IALKLARVVT GRFKTISMWD AFHGASLDAI SVGGEAAFRR 

       190        200        210        220        230        240 
GIGPLLPGSE HVPPHAPQAC AFGCGGQCAL RCADYVEYVL RKEGDVAAVV VETVRCTDVQ 

       250        260        270        280        290        300 
VPPPDYYRRL RAACDRHGAL LILDEIPIAL GRTGRMFAVE HYGIEPDMLV LGKGLGGGSM 

       310        320        330        340        350        360 
PLAALVARGR FDVAQAISLG HYTHEKNPVA SAAALATLDV IADEGLVERS RDLGAALLAR 

       370        380        390        400        410        420 
LRAECAGLPW VAEVRGLGLL LGIELRDGGG LAAEARAEAL LYRCLSAGLS FKLGQGRVLV 

       430        440        450 
LAPPLNLPQA DLDWALEQLL AALRLADPRA 

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References

[1]"Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBRC 100245 / IL144.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012320 Genomic DNA. Translation: BAL96490.1.
RefSeqYP_005437989.1. NC_017075.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL96490; BAL96490; RGE_31510.
GeneID12027274.
KEGGrge:RGE_31510.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00823.

Enzyme and pathway databases

BioCycRGEL983917:GLJR-3184-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0HU03_RUBGI
AccessionPrimary (citable) accession number: I0HU03
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)