I0HU03 (I0HU03_RUBGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase EMBL BAL96490.1
EC=2.6.1.- EMBL BAL96490.1

Gene names

Ordered Locus Names:

RGE_31510 EMBL BAL96490.1

Organism

Rubrivivax gelatinosus (strain NBRC 100245 / IL144) [Complete proteome] [HAMAP] EMBL BAL96490.1

Taxonomic identifier

983917 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › unclassified Burkholderiales › Burkholderiales Genera incertae sedis › Rubrivivax › Rubrivivax gelatinosus

Protein attributes

Sequence length	450 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAL96490.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I0HU03 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: 382C2AF5702F3108	FASTA	450	47,785
	10 20 30 40 50 60 MNPAPDASEG DLNLGRARQD WQARHLDEPT RALLAEDARW FFHQALSTPC LNALESAGGG 70 80 90 100 110 120 WLTDTAGRRV LDLHGNSLHQ VGHGHPRVVA AITETLATLP FSPRRYTNRP AVELARRLCG 130 140 150 160 170 180 LAPMPDAKLL LAPGGTAAIG IALKLARVVT GRFKTISMWD AFHGASLDAI SVGGEAAFRR 190 200 210 220 230 240 GIGPLLPGSE HVPPHAPQAC AFGCGGQCAL RCADYVEYVL RKEGDVAAVV VETVRCTDVQ 250 260 270 280 290 300 VPPPDYYRRL RAACDRHGAL LILDEIPIAL GRTGRMFAVE HYGIEPDMLV LGKGLGGGSM 310 320 330 340 350 360 PLAALVARGR FDVAQAISLG HYTHEKNPVA SAAALATLDV IADEGLVERS RDLGAALLAR 370 380 390 400 410 420 LRAECAGLPW VAEVRGLGLL LGIELRDGGG LAAEARAEAL LYRCLSAGLS FKLGQGRVLV 430 440 450 LAPPLNLPQA DLDWALEQLL AALRLADPRA

References

[1]

"Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144." Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBRC 100245 / IL144.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012320 Genomic DNA. Translation: BAL96490.1.
RefSeq	YP_005437989.1. NC_017075.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAL96490; BAL96490; RGE_31510.
GeneID	12027274.
KEGG	rge:RGE_31510.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00823.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I0HU03_RUBGI

Accession

Primary (citable) accession number: I0HU03

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)