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Protein
Submitted name:

Aminotransferase

Gene

RGE_31510

Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-3184-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported (EC:2.6.1.-Imported)
Gene namesi
Ordered Locus Names:RGE_31510Imported
OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
Taxonomic identifieri983917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
ProteomesiUP000007883: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI0HU03.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0HU03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPAPDASEG DLNLGRARQD WQARHLDEPT RALLAEDARW FFHQALSTPC
60 70 80 90 100
LNALESAGGG WLTDTAGRRV LDLHGNSLHQ VGHGHPRVVA AITETLATLP
110 120 130 140 150
FSPRRYTNRP AVELARRLCG LAPMPDAKLL LAPGGTAAIG IALKLARVVT
160 170 180 190 200
GRFKTISMWD AFHGASLDAI SVGGEAAFRR GIGPLLPGSE HVPPHAPQAC
210 220 230 240 250
AFGCGGQCAL RCADYVEYVL RKEGDVAAVV VETVRCTDVQ VPPPDYYRRL
260 270 280 290 300
RAACDRHGAL LILDEIPIAL GRTGRMFAVE HYGIEPDMLV LGKGLGGGSM
310 320 330 340 350
PLAALVARGR FDVAQAISLG HYTHEKNPVA SAAALATLDV IADEGLVERS
360 370 380 390 400
RDLGAALLAR LRAECAGLPW VAEVRGLGLL LGIELRDGGG LAAEARAEAL
410 420 430 440 450
LYRCLSAGLS FKLGQGRVLV LAPPLNLPQA DLDWALEQLL AALRLADPRA
Length:450
Mass (Da):47,785
Last modified:June 13, 2012 - v1
Checksum:i382C2AF5702F3108
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012320 Genomic DNA. Translation: BAL96490.1.
RefSeqiYP_005437989.1. NC_017075.1.

Genome annotation databases

EnsemblBacteriaiBAL96490; BAL96490; RGE_31510.
GeneIDi12027274.
KEGGirge:RGE_31510.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012320 Genomic DNA. Translation: BAL96490.1.
RefSeqiYP_005437989.1. NC_017075.1.

3D structure databases

ProteinModelPortaliI0HU03.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL96490; BAL96490; RGE_31510.
GeneIDi12027274.
KEGGirge:RGE_31510.

Phylogenomic databases

KOiK00823.

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-3184-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
    Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 100245 / IL144Imported.

Entry informationi

Entry nameiI0HU03_RUBGI
AccessioniPrimary (citable) accession number: I0HU03
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 4, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.