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I0HRC1

- I0HRC1_RUBGI

UniProt

I0HRC1 - I0HRC1_RUBGI

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Protein
Submitted name:

Putative trehalose synthase

Gene
treS, RGE_22170
Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-2240-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative trehalose synthaseImported
Gene namesi
Name:treSImported
Ordered Locus Names:RGE_22170Imported
OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
Taxonomic identifieri983917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
ProteomesiUP000007883: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

I0HRC1-1 [UniParc]FASTAAdd to Basket

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MKGEDLSAIT ATQTQPPADA AAPALDPLWF KDAVIYELHI KSFADSNGDG     50
IGDLAGLISK LDYVRDLGVN TIWLLPFYPS PLRDDGYDVA DFMAVNPAYG 100
TAADVARLVA EAHARGLRVI TELVVNHTSD QHPWFQRARR APRGSPERDF 150
YVWSDDPTRY AGTRIIFTDT EKSNWTWDEV AGQYFWHRFF SHQPDLNFDN 200
PAVREAVFGI MEFWLEQGVD GFRLDAIPYL VEREGTSNEN LRETHEVIKE 250
IRRRLDAKYP GKLLLAEANM WPEDVREYFG EDDECHMAYH FPLMPRMYMA 300
IAQEDRHPVV EILQQTPDIS PQCQWAIFLR NHDELTLEMV TSRERDYMYS 350
MYAADPRARL NLGIRRRLAP LLENDAERIK LMNSLLLSMP GSPVLYYGDE 400
IGMGDNIFLG DRDGVRTPMQ WTSDRNGGFS RADPQRLVLP AIQDPIYGFE 450
AVNVEAQSRD ASSLLNWTRR MLAIRRSTQV FGRGRIRMLH PGNRKVLAYL 500
RELGDEVVLC VANLGRAPQP VELDLSRYKG RVPVEMGAHT AFPPIGELPY 550
LLTLAGHGFF WFRLATDAAP PDWHADRRPV EHLPVLVMFD GWNSFFRDRV 600
VPWRIAMAGK TLAQLEDELL PPHLARQRWF DAGEPPAQAR IGTHATLAQD 650
GREWLLALVD TRGGPHEDAR WFSPLAVAWE DDEADQGRLG QLGPAALAKA 700
RMQARIGLLG DAGGDEAFCR ALVAAVAAGR SLPAAGGGQI RFVALRGFDA 750
GIAAELDTLA VRAVPQGRNT TLQLGDRLFV KLLRRLRPGV NVEVEMGRHL 800
REVAHFEHAV VPVGHVEHVA ADGTVSTLAV LQPWVVHQGN AWDFALMQLT 850
RHLERAAPAP AESVGAAEGG LMARVRALAE RLAALHEALA LRRGDAAFDP 900
EPLQPEDLRR AAAATAQLAH TTLALLAEAT PRLPAAQQPL ARRLAAGERT 950
LRDRLAACAA HGAGGPKLRI HGALRLQEVL LVHEDFVLAD FEGDPSLPPA 1000
ERRARQSPLR DVAGLLHSLD LVRAAALQRG AHTEAENRRR EALADAWAGE 1050
LRRAFVDSYA ERALALGLVA GADAFEGPAS TLALFEIDAA LRELHDELRR 1100
RPAGATAPLA ALATLAQRLG P 1121
Length:1,121
Mass (Da):124,307
Last modified:June 13, 2012 - v1
Checksum:iF1DF8FEB0BB1188E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL95558.1.
RefSeqiWP_014428420.1. NC_017075.1.
YP_005437057.1. NC_017075.1.

Genome annotation databases

EnsemblBacteriaiBAL95558; BAL95558; RGE_22170.
GeneIDi12026330.
KEGGirge:RGE_22170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL95558.1 .
RefSeqi WP_014428420.1. NC_017075.1.
YP_005437057.1. NC_017075.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL95558 ; BAL95558 ; RGE_22170 .
GeneIDi 12026330.
KEGGi rge:RGE_22170.

Phylogenomic databases

KOi K05343.

Enzyme and pathway databases

BioCyci RGEL983917:GLJR-2240-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
TIGRFAMsi TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
    Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 100245 / IL144.

Entry informationi

Entry nameiI0HRC1_RUBGI
AccessioniPrimary (citable) accession number: I0HRC1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: September 3, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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