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I0HKR7

- I0HKR7_RUBGI

UniProt

I0HKR7 - I0HKR7_RUBGI

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Protein
Submitted name: Alpha-amylase MalS
Gene
malS, RGE_02590
Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciRGEL983917:GLJR-260-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase MalSImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:RGE_02590Imported
OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
Taxonomic identifieri983917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
ProteomesiUP000007883: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I0HKR7-1 [UniParc]FASTAAdd to Basket

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MMFRRTVAAL AAALALGSAA AADEPVARPG RFADNPIVYF VVTDRFANGN    50
PANDGSYGRK REAKPQDDIG SFHGGDLAGL TAKLREGWFR ELGVNAIWIT 100
APYEQIHGWV VGGSKEFKHY GYHGYFALDY TKLDANMGTP AELRELVATA 150
HAQGIRILFD VVMNHPGYGD IQSLSEYVTE PETDKKRGML WKGYEAATLR 200
DYHSWIDYND PAWLQWWGPD WIRSGLRGYT EGGSDDLTKQ LAFLPDFKTE 250
SDKPVGLPPF LKKKADTEAV ELPNTTVRGY LVAWLSRWVR DYGIDGFRAD 300
TVKHVEYPSW TALKDASTKA LAEWKAANPK AAIDDAPFWM TGENWGQGIE 350
RTRHYDIGFD NMINFDFQRR AEAKGAELDK VYAEYARTLA APATHNVLSY 400
ISSHDTKLFD RKAILDGATA LMLAPGGVQI YYGDESARPD GPAAYGDPQQ 450
STRSDMNWAS LDSAALAHWR KLGQFRARHV AVARGKHWQI AAQPYTFARV 500
LPEDRIVAAV GARGTVTISV ADVFADGTRV HDAYGGGSAT VAGGKVTLDA 550
DPRGVVLLEA LK 562
Length:562
Mass (Da):61,987
Last modified:June 13, 2012 - v1
Checksum:iE4EDDDCF0393F687
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL93604.1.
RefSeqiYP_005435103.1. NC_017075.1.

Genome annotation databases

EnsemblBacteriaiBAL93604; BAL93604; RGE_02590.
GeneIDi12028238.
KEGGirge:RGE_02590.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012320 Genomic DNA. Translation: BAL93604.1 .
RefSeqi YP_005435103.1. NC_017075.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL93604 ; BAL93604 ; RGE_02590 .
GeneIDi 12028238.
KEGGi rge:RGE_02590.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci RGEL983917:GLJR-260-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
    Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBRC 100245 / IL144.

Entry informationi

Entry nameiI0HKR7_RUBGI
AccessioniPrimary (citable) accession number: I0HKR7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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