Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

I0HKR7

- I0HKR7_RUBGI

UniProt

I0HKR7 - I0HKR7_RUBGI

Protein
Submitted name:

Alpha-amylase MalS

Gene

malS

Organism
Rubrivivax gelatinosus (strain NBRC 100245 / IL144)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciRGEL983917:GLJR-260-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase MalSImported (EC:3.2.1.1Imported)
    Gene namesi
    Name:malSImported
    Ordered Locus Names:RGE_02590Imported
    OrganismiRubrivivax gelatinosus (strain NBRC 100245 / IL144)Imported
    Taxonomic identifieri983917 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesRubrivivax
    ProteomesiUP000007883: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I0HKR7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMFRRTVAAL AAALALGSAA AADEPVARPG RFADNPIVYF VVTDRFANGN    50
    PANDGSYGRK REAKPQDDIG SFHGGDLAGL TAKLREGWFR ELGVNAIWIT 100
    APYEQIHGWV VGGSKEFKHY GYHGYFALDY TKLDANMGTP AELRELVATA 150
    HAQGIRILFD VVMNHPGYGD IQSLSEYVTE PETDKKRGML WKGYEAATLR 200
    DYHSWIDYND PAWLQWWGPD WIRSGLRGYT EGGSDDLTKQ LAFLPDFKTE 250
    SDKPVGLPPF LKKKADTEAV ELPNTTVRGY LVAWLSRWVR DYGIDGFRAD 300
    TVKHVEYPSW TALKDASTKA LAEWKAANPK AAIDDAPFWM TGENWGQGIE 350
    RTRHYDIGFD NMINFDFQRR AEAKGAELDK VYAEYARTLA APATHNVLSY 400
    ISSHDTKLFD RKAILDGATA LMLAPGGVQI YYGDESARPD GPAAYGDPQQ 450
    STRSDMNWAS LDSAALAHWR KLGQFRARHV AVARGKHWQI AAQPYTFARV 500
    LPEDRIVAAV GARGTVTISV ADVFADGTRV HDAYGGGSAT VAGGKVTLDA 550
    DPRGVVLLEA LK 562
    Length:562
    Mass (Da):61,987
    Last modified:June 13, 2012 - v1
    Checksum:iE4EDDDCF0393F687
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012320 Genomic DNA. Translation: BAL93604.1.
    RefSeqiYP_005435103.1. NC_017075.1.

    Genome annotation databases

    EnsemblBacteriaiBAL93604; BAL93604; RGE_02590.
    GeneIDi12028238.
    KEGGirge:RGE_02590.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012320 Genomic DNA. Translation: BAL93604.1 .
    RefSeqi YP_005435103.1. NC_017075.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL93604 ; BAL93604 ; RGE_02590 .
    GeneIDi 12028238.
    KEGGi rge:RGE_02590.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci RGEL983917:GLJR-260-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of phototrophic betaproteobacterium Rubrivivax gelatinosus IL144."
      Nagashima S., Sekine M., Takami A., Shimizu T., Nakamura S., Aono E., Sakamoto K., Nakazawa H., Yamazaki S., Fujita N., Shimada K., Hanada S., Nagashima K.
      Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 100245 / IL144Imported.

    Entry informationi

    Entry nameiI0HKR7_RUBGI
    AccessioniPrimary (citable) accession number: I0HKR7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3