I0GS65 (I0GS65_SELRL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative GntR family transcriptional regulator EMBL BAL83602.1

Gene names

Ordered Locus Names:

SELR_18940 EMBL BAL83602.1

Organism

Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) [Complete proteome] [HAMAP] EMBL BAL83602.1

Taxonomic identifier

927704 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Negativicutes › Selenomonadales › Veillonellaceae › Selenomonas › Selenomonas ruminantium › Selenomonas ruminantium subsp. lactilytica

Protein attributes

Sequence length	236 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. SAAS SAAS011711 RuleBase RU000706

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS011711 RuleBase RU000706
Ligand	DNA-binding SAAS SAAS011711 RuleBase RU000706
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I0GS65 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: 3832AB3A2532DC59	FASTA	236	26,960
	10 20 30 40 50 60 MKNRLAPIKL DSYQPLREVV CESLREAIRN GILKPGERIM EIQLAEELGV SRTPVREASR 70 80 90 100 110 120 KLELEGYVVM MPRRGTYVAS MSIRDINEIF EIRTALESLS NGLAADHITD DELEHLQRLL 130 140 150 160 170 180 VIIGGYIKDG NIEKIVETDI EFHDTMYHAA RNERLVGIIS NLRDQLTRFR TLSMSYPGRL 190 200 210 220 230 EETLEEHKKI VEAIANGDRK SASKAAELHM ENSEKTLLKA MEAMENQKKA EKKSKK

References

[1]

"Whole genome sequence of Selenomonas ruminantium subsp. lactilytica TAM6421." Oguchi A., Ankai A., Kaneko J., Yamada-Narita S., Fukui S., Takahashi M., Onodera T., Kojima S., Fushimi T., Abe N., Kamio Y., Yamazaki S., Fujita N. Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBRC 103574 / TAM6421.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012292 Genomic DNA. Translation: BAL83602.1.
RefSeq	YP_005433625.1. NC_017068.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAL83602; BAL83602; SELR_18940.
GeneID	12024936.
KEGG	sri:SELR_18940.
Organism-specific databases
CMR	Search...
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR011711. GntR_C. IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF07729. FCD. 1 hit. PF00392. GntR. 1 hit. [Graphical view]
PRINTS	PR00035. HTHGNTR.
SMART	SM00895. FCD. 1 hit. SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I0GS65_SELRL

Accession

Primary (citable) accession number: I0GS65

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	May 1, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)