Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

I0GLC1

- I0GLC1_CALEA

UniProt

I0GLC1 - I0GLC1_CALEA

Protein
Submitted name:

Putative D-alanine--D-alanine ligase

Gene

CSE_14320

Organism
Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Cell wall formation.SAAS annotation

    Catalytic activityi

    ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.SAAS annotation

    Pathwayi

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
    3. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
    2. regulation of cell shape Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseSAAS annotationImported

    Keywords - Biological processi

    Cell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation

    Keywords - Ligandi

    ATP-bindingSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciCEXI511051:GLA9-1482-MONOMER.
    UniPathwayiUPA00219.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative D-alanine--D-alanine ligaseImported (EC:6.3.2.4Imported)
    Gene namesi
    Ordered Locus Names:CSE_14320Imported
    OrganismiCaldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01)Imported
    Taxonomic identifieri511051 [NCBI]
    Taxonomic lineageiBacteriaCaldisericaCaldisericiaCaldisericalesCaldisericaceaeCaldisericum
    ProteomesiUP000004793: Chromosome

    Subcellular locationi

    Cytoplasm SAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Contains ATP-grasp domain.SAAS annotation

    Phylogenomic databases

    KOiK01921.

    Family and domain databases

    Gene3Di3.30.1490.20. 1 hit.
    3.30.470.20. 1 hit.
    InterProiIPR011761. ATP-grasp.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR000291. D-Ala_lig_Van_CS.
    IPR005905. D_ala_D_ala.
    IPR011095. Dala_Dala_lig_C.
    IPR016185. PreATP-grasp_dom.
    [Graphical view]
    PANTHERiPTHR23132. PTHR23132. 1 hit.
    PfamiPF07478. Dala_Dala_lig_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF52440. SSF52440. 1 hit.
    PROSITEiPS50975. ATP_GRASP. 1 hit.
    PS00844. DALA_DALA_LIGASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0GLC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVGITFNLK RSETELDEFD RPVTIEAIKR ALEARGHKVK LYEATSPLLF    50
    YSLTIDRPQF VFNIAEGKYG AYREAFVPAL LDELRIPYTG SSVLSLAISM 100
    DKVMTKEVLL YHGIPTPKFK VLKVIDPIEI GDLNYPVIVK PIFEGSSIGI 150
    TSKSICENDI ELKEAAEKAF RKFKRPIMVE EFIGGMEVTV GVMGNFPPQV 200
    LPPMEIDFST LSKRELKASP YIQTYKFKTD YSDKANYYLP ARLPVEVLQK 250
    ITEIVKNAFI ALRNRDVARF DLRVDKNYNP YILEVNPLPG LDPEHSDLPR 300
    IYKLMGKTYG DLINDILQVA VERYRLETKI SYNHEE 336
    Length:336
    Mass (Da):38,441
    Last modified:June 13, 2012 - v1
    Checksum:i93986DD250E08DF5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012051 Genomic DNA. Translation: BAL81558.1.
    RefSeqiYP_005473661.1. NC_017096.1.

    Genome annotation databases

    EnsemblBacteriaiBAL81558; BAL81558; CSE_14320.
    GeneIDi12060059.
    KEGGicex:CSE_14320.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012051 Genomic DNA. Translation: BAL81558.1 .
    RefSeqi YP_005473661.1. NC_017096.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL81558 ; BAL81558 ; CSE_14320 .
    GeneIDi 12060059.
    KEGGi cex:CSE_14320.

    Phylogenomic databases

    KOi K01921.

    Enzyme and pathway databases

    UniPathwayi UPA00219 .
    BioCyci CEXI511051:GLA9-1482-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1490.20. 1 hit.
    3.30.470.20. 1 hit.
    InterProi IPR011761. ATP-grasp.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR000291. D-Ala_lig_Van_CS.
    IPR005905. D_ala_D_ala.
    IPR011095. Dala_Dala_lig_C.
    IPR016185. PreATP-grasp_dom.
    [Graphical view ]
    PANTHERi PTHR23132. PTHR23132. 1 hit.
    Pfami PF07478. Dala_Dala_lig_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52440. SSF52440. 1 hit.
    PROSITEi PS50975. ATP_GRASP. 1 hit.
    PS00844. DALA_DALA_LIGASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequence of Caldisericum exile AZM16c01."
      Narita-Yamada S., Kawakoshi A., Nakamura S., Sasagawa M., Fukada J., Sekine M., Kato Y., Fukai R., Sasaki K., Hanamaki A., Narita H., Konno Y., Mori K., Yamazaki S., Suzuki K., Fujita N.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 21853 / NBRC 104410 / AZM16c01Imported.

    Entry informationi

    Entry nameiI0GLC1_CALEA
    AccessioniPrimary (citable) accession number: I0GLC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3