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I0GGG9

- I0GGG9_9BRAD

UniProt

I0GGG9 - I0GGG9_9BRAD

Protein
Submitted name:

Putative ATP dependent DNA ligase

Gene

S23_66790

Organism
Bradyrhizobium sp. S23321
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSP335659:GL9K-6673-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:S23_66790Imported
    OrganismiBradyrhizobium sp. S23321Imported
    Taxonomic identifieri335659 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000007886: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0GGG9-1 [UniParc]FASTAAdd to Basket

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    MNRFAELLDR LAYEPGRNNK LRLITSYFRE TGDPDRGYAL AALTGALSFK    50
    HAKPGLIRDL IASRTDPVLF GLSYDYVGDL SETVALMWPK AALAAHNNPP 100
    PPTLTEVVTT LRTLGKTELP KQLERWLDEL DETGRWALLK LVTGSLRIGI 150
    SARLAKTAAA ALGGKDPHEV ELIWPGLSAP YLDLFAWLEG RGDKPVNLDP 200
    APFRPVMLAH AIEDADFQNL DPADYIAEWK WDGIRVQAVA GRDERGQITA 250
    RLYSRTGEDI TGSFPDLVPS LHLPGAIDGE LLILREGRVQ SFNVLQQRLN 300
    RKVVSPKLIK EFPIHLRAYD LLGDDENDLR ELSFAGRRER LETFVAKLGD 350
    SRIDLSPTVP FASWDALTAA RADPAIAGAG EDADAVEGVM LKRRDAPYLP 400
    GRPKGQWWKW KRDPHIIDAV LMYAQRGHGK RSSYYSDYTF GVWTEGDGGD 450
    ELVPVGKAYF GFTDEELLQI DRFVRRNTTE KFGPVRHVVH EGDKGLVLEV 500
    AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL EKMLKTDESL 550
    PTIKVAASAD NH 562
    Length:562
    Mass (Da):62,919
    Last modified:June 13, 2012 - v1
    Checksum:i3A8B3E2B2F89C71E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012279 Genomic DNA. Translation: BAL79856.1.
    RefSeqiWP_015689112.1. NC_017082.1.
    YP_005453968.1. NC_017082.1.

    Genome annotation databases

    EnsemblBacteriaiBAL79856; BAL79856; S23_66790.
    GeneIDi12043775.
    KEGGibrs:S23_66790.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012279 Genomic DNA. Translation: BAL79856.1 .
    RefSeqi WP_015689112.1. NC_017082.1.
    YP_005453968.1. NC_017082.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL79856 ; BAL79856 ; S23_66790 .
    GeneIDi 12043775.
    KEGGi brs:S23_66790.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BSP335659:GL9K-6673-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S23321Imported.

    Entry informationi

    Entry nameiI0GGG9_9BRAD
    AccessioniPrimary (citable) accession number: I0GGG9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3