I0GGG9 (I0GGG9_9BRAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ATP dependent DNA ligase EMBL BAL79856.1

Gene names

ORF Names:

S23_66790 EMBL BAL79856.1

Organism

Bradyrhizobium sp. S23321 EMBL BAL79856.1

Taxonomic identifier

335659 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAL79856.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I0GGG9 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: 3A8B3E2B2F89C71E	FASTA	562	62,919
	10 20 30 40 50 60 MNRFAELLDR LAYEPGRNNK LRLITSYFRE TGDPDRGYAL AALTGALSFK HAKPGLIRDL 70 80 90 100 110 120 IASRTDPVLF GLSYDYVGDL SETVALMWPK AALAAHNNPP PPTLTEVVTT LRTLGKTELP 130 140 150 160 170 180 KQLERWLDEL DETGRWALLK LVTGSLRIGI SARLAKTAAA ALGGKDPHEV ELIWPGLSAP 190 200 210 220 230 240 YLDLFAWLEG RGDKPVNLDP APFRPVMLAH AIEDADFQNL DPADYIAEWK WDGIRVQAVA 250 260 270 280 290 300 GRDERGQITA RLYSRTGEDI TGSFPDLVPS LHLPGAIDGE LLILREGRVQ SFNVLQQRLN 310 320 330 340 350 360 RKVVSPKLIK EFPIHLRAYD LLGDDENDLR ELSFAGRRER LETFVAKLGD SRIDLSPTVP 370 380 390 400 410 420 FASWDALTAA RADPAIAGAG EDADAVEGVM LKRRDAPYLP GRPKGQWWKW KRDPHIIDAV 430 440 450 460 470 480 LMYAQRGHGK RSSYYSDYTF GVWTEGDGGD ELVPVGKAYF GFTDEELLQI DRFVRRNTTE 490 500 510 520 530 540 KFGPVRHVVH EGDKGLVLEV AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL 550 560 EKMLKTDESL PTIKVAASAD NH

References

[1]

"Complete Genome Sequence of Bradyrhizobium sp. S23321: Insights into Symbiosis Evolution in Soil Oligotrophs." Okubo T., Tsukui T., Maita H., Okamoto S., Oshima K., Fujisawa T., Saito A., Futamata H., Hattori R., Shimomura Y., Haruta S., Morimoto S., Wang Y., Sakai Y., Hattori M., Aizawa S., Nagashima, K V.P. , Masuda S., Hattori T., Yamashita A., Bao Z., Hayatsu M., Kajiya-Kanegae H., Yoshinaga I., Sakamoto K., Toyota K., Nakao M., Kohara M., Anda M., Niwa R., Jung-Hwan P., Sameshima-Saito R., Tokuda S., Yamamoto S., Yamamoto S., Yokoyama T., Akutsu T., Nakamura Y., Nakahira-Yanaka Y., Takada Hoshino Y., Hirakawa H., Mitsui H., Terasawa K., Itakura M., Sato S., Ikeda-Ohtsubo W., Sakakura N., Kaminuma E., Minamisawa K. Microbes Environ. 0:0-0(2012) Cited for: NUCLEOTIDE SEQUENCE. Strain: S23321 EMBL BAL79856.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012279 Genomic DNA. Translation: BAL79856.1.
RefSeq	YP_005453968.1. NC_017082.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAL79856; BAL79856; S23_66790.
GeneID	12043775.
KEGG	brs:S23_66790.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I0GGG9_9BRAD

Accession

Primary (citable) accession number: I0GGG9

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)