Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

I0G1W9

- I0G1W9_9BRAD

UniProt

I0G1W9 - I0G1W9_9BRAD

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

S23_15390

Organism
Bradyrhizobium sp. S23321
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSP335659:GL9K-1539-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:S23_15390Imported
    OrganismiBradyrhizobium sp. S23321Imported
    Taxonomic identifieri335659 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000007886: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0G1W9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLRKLSTYRQ KRDFEQTPEP SGRTAVTRSK QRRFVIQKHD ATRLHYDLRL    50
    EFDGVFKSWA VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG 100
    TVMLWDRGTW DCEDPEAGFK KGDLKFTLHG DKLHGSWVLV RMRNDRTGGK 150
    RTNWLLIKHR DEFASESEDI LSEDKSVASG RAMAEIAKGK GRAPKPFMLA 200
    KGATTKADAV WQSNRAEETK GRTVKAAPRA ALKTSKAAKK KAMTASTAKE 250
    VSEMPDFVAP QLCTLVERPP SGDGWCHEIK FDGYRVQLRI EDGKATLRTR 300
    KGLDWTDKFA AIAKEAATLP DAMIDGEIVA LDHHGAPNFS SLQAALSDGK 350
    TNELIFFAFD LLFAEGLDCR RLPLSERKTR LKKLVEAPKK KVSQIRFVEH 400
    FESGGDAVLQ SACKLELEGI VSKKLDAPYR SGRTESWTKA KCRAGHEVVI 450
    GGWKTTAGKF RSLMAGVHRG DHLAFVGMVG TGFGADKVKR IMPFLKEAAA 500
    SKSPFGGKNA PKKTRDVHWL KPELVAEIEF AGFTADGNIR QAAFKGLRQD 550
    KPAEEVEAEA PADIALAKPS AKRRVPAKAA KPSKPSGSAE VMGVVISKPD 600
    KELWPDAGDG EGVSKLDLAR YFEAVGAWMI EHLKGRPCSI LRAPDGIGGE 650
    KFFQRHAMPG SSNLLELAKV SGDRKPYLQI DRVEGLAAVA QIGGLELHPW 700
    NCAPNAYDTP GRLVFDLDPA PDVDFADVVD AAKEMRQRLT DLGMESFCKT 750
    TGGKGLHVVV PLLHGVRDRV SWKEAKAFAQ GVCQWMADDE PERYLLNMSK 800
    KLRNGKIFLD YLRNDRMSTA VGPLSPRARD GATVSMPVTW AQVKSDLDPK 850
    RYTVRTVPGL LARSKAWDGY DDAAASIKAA MKKLAGKKK 889
    Length:889
    Mass (Da):97,921
    Last modified:June 13, 2012 - v1
    Checksum:i02B1B4E918A21983
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012279 Genomic DNA. Translation: BAL74756.1.
    RefSeqiWP_015684090.1. NC_017082.1.
    YP_005448868.1. NC_017082.1.

    Genome annotation databases

    EnsemblBacteriaiBAL74756; BAL74756; S23_15390.
    GeneIDi12039877.
    KEGGibrs:S23_15390.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012279 Genomic DNA. Translation: BAL74756.1 .
    RefSeqi WP_015684090.1. NC_017082.1.
    YP_005448868.1. NC_017082.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL74756 ; BAL74756 ; S23_15390 .
    GeneIDi 12039877.
    KEGGi brs:S23_15390.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BSP335659:GL9K-1539-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S23321Imported.

    Entry informationi

    Entry nameiI0G1W9_9BRAD
    AccessioniPrimary (citable) accession number: I0G1W9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3