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I0G1W9 (I0G1W9_9BRAD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:S23_15390 EMBL BAL74756.1
OrganismBradyrhizobium sp. S23321 [Complete proteome] EMBL BAL74756.1
Taxonomic identifier335659 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length889 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL BAL74756.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I0G1W9 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 02B1B4E918A21983

FASTA88997,921
        10         20         30         40         50         60 
MLRKLSTYRQ KRDFEQTPEP SGRTAVTRSK QRRFVIQKHD ATRLHYDLRL EFDGVFKSWA 

        70         80         90        100        110        120 
VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG TVMLWDRGTW DCEDPEAGFK 

       130        140        150        160        170        180 
KGDLKFTLHG DKLHGSWVLV RMRNDRTGGK RTNWLLIKHR DEFASESEDI LSEDKSVASG 

       190        200        210        220        230        240 
RAMAEIAKGK GRAPKPFMLA KGATTKADAV WQSNRAEETK GRTVKAAPRA ALKTSKAAKK 

       250        260        270        280        290        300 
KAMTASTAKE VSEMPDFVAP QLCTLVERPP SGDGWCHEIK FDGYRVQLRI EDGKATLRTR 

       310        320        330        340        350        360 
KGLDWTDKFA AIAKEAATLP DAMIDGEIVA LDHHGAPNFS SLQAALSDGK TNELIFFAFD 

       370        380        390        400        410        420 
LLFAEGLDCR RLPLSERKTR LKKLVEAPKK KVSQIRFVEH FESGGDAVLQ SACKLELEGI 

       430        440        450        460        470        480 
VSKKLDAPYR SGRTESWTKA KCRAGHEVVI GGWKTTAGKF RSLMAGVHRG DHLAFVGMVG 

       490        500        510        520        530        540 
TGFGADKVKR IMPFLKEAAA SKSPFGGKNA PKKTRDVHWL KPELVAEIEF AGFTADGNIR 

       550        560        570        580        590        600 
QAAFKGLRQD KPAEEVEAEA PADIALAKPS AKRRVPAKAA KPSKPSGSAE VMGVVISKPD 

       610        620        630        640        650        660 
KELWPDAGDG EGVSKLDLAR YFEAVGAWMI EHLKGRPCSI LRAPDGIGGE KFFQRHAMPG 

       670        680        690        700        710        720 
SSNLLELAKV SGDRKPYLQI DRVEGLAAVA QIGGLELHPW NCAPNAYDTP GRLVFDLDPA 

       730        740        750        760        770        780 
PDVDFADVVD AAKEMRQRLT DLGMESFCKT TGGKGLHVVV PLLHGVRDRV SWKEAKAFAQ 

       790        800        810        820        830        840 
GVCQWMADDE PERYLLNMSK KLRNGKIFLD YLRNDRMSTA VGPLSPRARD GATVSMPVTW 

       850        860        870        880 
AQVKSDLDPK RYTVRTVPGL LARSKAWDGY DDAAASIKAA MKKLAGKKK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012279 Genomic DNA. Translation: BAL74756.1.
RefSeqYP_005448868.1. NC_017082.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL74756; BAL74756; S23_15390.
GeneID12039877.
KEGGbrs:S23_15390.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBSP335659:GL9K-1539-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0G1W9_9BRAD
AccessionPrimary (citable) accession number: I0G1W9
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)