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I0FA14 (I0FA14_9BACI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Thymidine kinase RuleBase RU000544 HAMAP-Rule MF_00124

EC=2.7.1.21 RuleBase RU000544 HAMAP-Rule MF_00124
Gene names
Name:tdk HAMAP-Rule MF_00124
ORF Names:MY9_3788 EMBL AFI30320.1
OrganismBacillus sp. JS [Complete proteome] EMBL AFI30320.1
Taxonomic identifier1127744 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length195 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. SAAS SAAS020633 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020633 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding15 – 228ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding88 – 914ATP By similarity HAMAP-Rule MF_00124

Sites

Active site891Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1481Zinc By similarity HAMAP-Rule MF_00124
Metal binding1831Zinc By similarity HAMAP-Rule MF_00124
Metal binding1861Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
I0FA14 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: C995938EAA85EDAE

FASTA19521,480
        10         20         30         40         50         60 
MYIMKQSGWL ELICGSMFSG KSEELIRRVK RATYAKQEVR VFKPVIDNRY SEAAVVSHNG 

        70         80         90        100        110        120 
TSMTSYAISS AADIWDHISE STDVIAVDEV QFFDQEIVEV LSSLADKGYR VIAAGLDMDF 

       130        140        150        160        170        180 
RGEPFGVVPN IMAIAESVTK LQAVCSVCGS PASRTQRLID GKPASYDDPV ILVGASESYE 

       190 
ARCRHHHEVP GKSKK 

« Hide

References

[1]"Genome Sequence of the Plant Growth-Promoting Rhizobacterium Bacillus sp. Strain JS."
Song J.Y., Kim H.A., Kim J.S., Kim S.Y., Jeong H., Kang S.G., Kim B.K., Kwon S.K., Lee C.H., Yu D.S., Kim B.S., Kim S.H., Kwon S.Y., Kim J.F.
J. Bacteriol. 194:3760-3761(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JS EMBL AFI30320.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003492 Genomic DNA. Translation: AFI30320.1.
RefSeqYP_006233576.1. NC_017743.1.

3D structure databases

ProteinModelPortalI0FA14.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFI30320; AFI30320; MY9_3788.
GeneID12767139.
KEGGbjs:MY9_3788.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycBSP1127744:GL8I-3899-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0FA14_9BACI
AccessionPrimary (citable) accession number: I0FA14
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)