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I0F934 (I0F934_9BACI) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084

Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
ORF Names:MY9_3458 EMBL AFI29990.1
OrganismBacillus sp. JS [Complete proteome] EMBL AFI29990.1
Taxonomic identifier1127744 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length686 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1581Proton donor By similarity PIRSR PIRSR001084-1
Active site3221Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1231Zinc By similarity
Metal binding1631Zinc By similarity
Metal binding1651Zinc By similarity
Metal binding1681Zinc By similarity
Binding site1191Substrate By similarity PIRSR PIRSR001084-2
Binding site1571Substrate By similarity PIRSR PIRSR001084-2
Binding site3301Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
I0F934 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 9DC8AE3CB2618C2D

FASTA68679,096
        10         20         30         40         50         60 
MSKLEKTHVT EANFMLHGGD YNPDQWLDRP DILADDIKLM KLSHTNTFSV GIFAWSALEP 

        70         80         90        100        110        120 
EEGVYQFDWL DDIFERIHSI GGRVILATPS GARPAWLSQA YPEVLRVNAS RVKQLHGGRH 

       130        140        150        160        170        180 
NHCLTSKVYR EKTRHINRLL AERYGNHPAL LMWHISNEYG GDCHCDLCQH AFREWLKSKY 

       190        200        210        220        230        240 
DNSLKTLNRA WWTPFWSHTF NDWSQIESPS PIGENGLHGL NLDWRRFVTD QTISFYENEI 

       250        260        270        280        290        300 
VPLKELTPDV PITTNFMADT PDLIPYQGLD YSKFAKHVDA ISWDAYPVWH NDWESTADLA 

       310        320        330        340        350        360 
MKVGFINDLY RSLKQQPFLL MECTPSAVNW HNVNKAKRPG MNLLSSMQMI AHGSDSVLYF 

       370        380        390        400        410        420 
QYRKSRGSSE KLHGAVVDHD NSPKNRVFQE VAKVGETLER LSEVVGTKRP AQTAILYDWE 

       430        440        450        460        470        480 
NHWALEDAQG FAKATKRYPQ TLQQHYRTFW EHDIPVDVIT KEQDFSPYKL LIVPMLYLIS 

       490        500        510        520        530        540 
EDTISRLKAF TADGGTLVMT YISGIVNEHD LTYTGGWHPD LQAIFGIEPL ETDTLYPKDR 

       550        560        570        580        590        600 
NAVSYRGKTY EMKDYATVID VKTASTEAVY QEDFYARTPA VTSHQYQQGK AYFIGARLED 

       610        620        630        640        650        660 
QFHRDFYEGL ITDLSLSPVF PVRHGKGVSV QARQDQDNDY IFVMNFTEEK QLITFEQSVK 

       670        680 
DMMTGDILSG DLTMEKYEVR IVVNTH 

« Hide

References

[1]"Genome Sequence of the Plant Growth-Promoting Rhizobacterium Bacillus sp. Strain JS."
Song J.Y., Kim H.A., Kim J.S., Kim S.Y., Jeong H., Kang S.G., Kim B.K., Kwon S.K., Lee C.H., Yu D.S., Kim B.S., Kim S.H., Kwon S.Y., Kim J.F.
J. Bacteriol. 194:3760-3761(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JS EMBL AFI29990.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003492 Genomic DNA. Translation: AFI29990.1.
RefSeqYP_006233246.1. NC_017743.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFI29990; AFI29990; MY9_3458.
GeneID12766807.
KEGGbjs:MY9_3458.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK12308.

Enzyme and pathway databases

BioCycBSP1127744:GL8I-3568-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0F934_9BACI
AccessionPrimary (citable) accession number: I0F934
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)