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I0E534 (I0E534_HELPX) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase EMBL AFH98052.1
Gene names
ORF Names:HPSH417_04585 EMBL AFH98052.1
OrganismHelicobacter pylori Shi417 EMBL AFH98052.1
Taxonomic identifier1163739 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter ›

Protein attributes

Sequence length377 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS011079

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS011079
   Molecular functionIsomerase SAAS SAAS011079
Gene Ontology (GO)
   Biological_processalanine metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I0E534 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 0F2EEBA279A5AFC1

FASTA37741,893
        10         20         30         40         50         60 
MLKRASFVEV NTASLRHNFS AVKSIVPKDA HIMAVVKANA YGVGAIKASE IFLQEGANYL 

        70         80         90        100        110        120 
GVATLDEALE LRSYFSKTPI LILGYSPNSN ASMLIDNDLS AMIFSLEQAE VFSQTALKSQ 

       130        140        150        160        170        180 
KRLKVHLKID TGMHRLGLEP NFKSIEIIKK IRALKGLEME GIFTHLSNAD AKIKTHAKNQ 

       190        200        210        220        230        240 
MKAFNAFLEQ LLNQKIEFQY RHAYNSAGIL SLCNGNENRF LNLYRPGIML YGFYPSNGMK 

       250        260        270        280        290        300 
ETCPTILKNV ISLKAQIVQI RSVKKGEFIG YGEHFYTNEE TLVGVLALGY ADGLMRALGN 

       310        320        330        340        350        360 
RIQVAINNQL APLIGKVCMD QCFVKLNNIQ AKEGDEVILF GDKSAKANDA SEIAALLNTI 

       370 
PYETISTLSK RLERVYI

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References

[1]Kersulyte D., Cabrera L., Pacheco R., Herrera P., Rodriguez C., Gilman R.H., Berg D.E.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Shi417 EMBL AFH98052.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003472 Genomic DNA. Translation: AFH98052.1.
RefSeqYP_006224546.1. NC_017739.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFH98052; AFH98052; HPSH417_04585.
GeneID12775303.
KEGGhhr:HPSH417_04585.

Phylogenomic databases

KOK01775.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0E534_HELPX
AccessionPrimary (citable) accession number: I0E534
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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