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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

B2K_12050

Organism
Paenibacillus mucilaginosus K02
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMUC997761:GLI6-2450-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:B2K_12050Imported
OrganismiPaenibacillus mucilaginosus K02Imported
Taxonomic identifieri997761 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000007392 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI0BGE7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0BGE7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFISPMLLET AKHPFSNEHY LFEPKIDGHR LVLSRQGGQT RLYTRHHNDC
60 70 80 90 100
TFQYPELNPI ALDDVILDGE VAATDASGAI DFEAVMERFA LRRADKVRRA
110 120 130 140 150
AAERPVNYIV FDVLRYNGVD LRGLPLYRRK EILAGIDFGN PYMAKVPVVP
160 170 180 190 200
KEGERLFEQI AARQLEGIVA KRMDSVYVGH RSEAWLKIIN WQYAEVYLTG
210 220 230 240 250
YKKEGFGWLA ASAGPGGILK PAGLIELGIT PKHRTAFNGV RDQLQTGEDG
260 270 280
EFVYLEPKLK AKVKMRNWTR AGLLRSPVFM EFCR
Length:284
Mass (Da):32,270
Last modified:June 13, 2012 - v1
Checksum:iA87D5C56A4BFDB0E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003422 Genomic DNA. Translation: AFH61444.1.
RefSeqiWP_014369638.1. NC_017672.3.
YP_006189209.1. NC_017672.3.

Genome annotation databases

EnsemblBacteriaiAFH61444; AFH61444; B2K_12050.
KEGGipmw:B2K_12050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003422 Genomic DNA. Translation: AFH61444.1.
RefSeqiWP_014369638.1. NC_017672.3.
YP_006189209.1. NC_017672.3.

3D structure databases

ProteinModelPortaliI0BGE7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFH61444; AFH61444; B2K_12050.
KEGGipmw:B2K_12050.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciPMUC997761:GLI6-2450-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Paenibacillus mucilaginosus K02."
    Xiao B., Sun L., Xiao L., Lian B.
    Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K02Imported.

Entry informationi

Entry nameiI0BGE7_9BACL
AccessioniPrimary (citable) accession number: I0BGE7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 29, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.