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I0BBD6 (I0BBD6_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site391Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2671Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1361Substrate By similarity HAMAP-Rule MF_01201
Binding site3151Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue391N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
I0BBD6 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 91C1C106FB920DEC

FASTA39444,280
        10         20         30         40         50         60 
MDSFYRPTRV EISLDALRHN IGEFRRVLPE HVRMMAVVKA DAYGHGAVEV CREVLQCGVE 

        70         80         90        100        110        120 
YIAVAFLDEG LELRKAGITA PILVLGYTPP EGLETAWNHD ITLNLYTDEL LDAWERLGPR 

       130        140        150        160        170        180 
ERPLRIHIKV DTGMNRIGVT GEEQAVTLIE RALGIPALQV EGLFTHYACA DEEDKSYTLQ 

       190        200        210        220        230        240 
QYARFQQVVE HFRSRGIEFP YVHAGNSAAA IDTPELTYNM VRLGISMYGL YPSDEVMKER 

       250        260        270        280        290        300 
VDLQPVLSIK TGVVMLKKVL AGEGISYGAV YRPQEEETIA TLPIGYADGF SRMLTGKAYA 

       310        320        330        340        350        360 
LIRGRRVPIV GRICMDQCMM NVTPLADISS EEEVVILGRQ GSETISAEEH AQWLGTVNYE 

       370        380        390 
VVCMISHRVP RMYIRGGQVV STINPLLRHL WERK 

« Hide

References

[1]"Complete genome sequence of Paenibacillus mucilaginosus K02."
Xiao B., Sun L., Xiao L., Lian B.
Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: K02 EMBL AFH59683.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003422 Genomic DNA. Translation: AFH59683.1.
RefSeqYP_006187448.1. NC_017672.3.

3D structure databases

ProteinModelPortalI0BBD6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFH59683; AFH59683; B2K_02900.
GeneID12736713.
KEGGpmw:B2K_02900.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycPMUC997761:GLI6-621-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0BBD6_9BACL
AccessionPrimary (citable) accession number: I0BBD6
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 19, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)