Skip Header

Contribute Send feedback
Read comments (?) or add your own

I0A2M7 (I0A2M7_FERFK) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AFH43234.1
Gene names
Ordered Locus Names:FFONT_1246 EMBL AFH43234.1
OrganismFervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) [Complete proteome] [HAMAP] EMBL AFH43234.1
Taxonomic identifier1163730 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Fervidicoccales › Fervidicoccaceae › Fervidicoccus ›

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFH43234.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I0A2M7 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 64DD0A545406A30F

FASTA38745,316
        10         20         30         40         50         60 
MESYKMGNFM ISSSLMADVL NISENEARKI LNSKNVRFLN YNDIEYLTFR RTIGRIPEGS 

        70         80         90        100        110        120 
VIIYSKNKKA LFVPGYPQIK RALILSTAIS RHFLDYIVVE EKLNGYNVRI VRYYGKILTI 

       130        140        150        160        170        180 
TRGGYICPYT TQKIKELLEK LGGKINKGEV VFVEVVGDEN PYTRYKYPNC NGFCFFVIDV 

       190        200        210        220        230        240 
LKGKKWLDVK QKERFCRERN LPCVKQYGIV KKDETAKLWE IIRKLEKDER EGIVLKDIKN 

       250        260        270        280        290        300 
RVSPLKYTTS YCNIGDIRDG MKFFFDEGKG YIFPRILREM FKIEEENLDK SELEKREIEL 

       310        320        330        340        350        360 
GKALLESAIE SINSFKKNGY LGEEFSLRFK NINEMNEFVS FMKKQGGLIE IREVKKENGE 

       370        380 
IIAKFLKRKR TEKIIEDIIK RGISPLD

« Hide

References

[1]"Fervidicoccus fontis complete genome analysis confirms its distinct phylogenetic position and predicts its environmental function."
Lebedinsky A.V., Mardanov A.V., Gumerov V.M., Beletsky A.V., Kublanov I.V., Perevalova A.A., Bonch-Osmolovskaya E.A., Ravin N.V., Skryabin K.G.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19380 / VKM B-2539 / Kam940.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003423 Genomic DNA. Translation: AFH43234.1.
RefSeqYP_005842686.1. NC_017461.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFH43234; AFH43234; FFONT_1246.
GeneID12450348.
KEGGffo:FFONT_1246.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0A2M7_FERFK
AccessionPrimary (citable) accession number: I0A2M7
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info