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Protein
Submitted name:

ATP dependent DNA ligase

Gene

FFONT_1246

Organism
Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciFFON1163730:GLD9-1284-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:FFONT_1246Imported
OrganismiFervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940)Imported
Taxonomic identifieri1163730 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiFervidicoccalesFervidicoccaceaeFervidicoccus
ProteomesiUP000007391: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK07468.
OMAiGYPHIGR.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

I0A2M7-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MESYKMGNFM ISSSLMADVL NISENEARKI LNSKNVRFLN YNDIEYLTFR
60 70 80 90 100
RTIGRIPEGS VIIYSKNKKA LFVPGYPQIK RALILSTAIS RHFLDYIVVE
110 120 130 140 150
EKLNGYNVRI VRYYGKILTI TRGGYICPYT TQKIKELLEK LGGKINKGEV
160 170 180 190 200
VFVEVVGDEN PYTRYKYPNC NGFCFFVIDV LKGKKWLDVK QKERFCRERN
210 220 230 240 250
LPCVKQYGIV KKDETAKLWE IIRKLEKDER EGIVLKDIKN RVSPLKYTTS
260 270 280 290 300
YCNIGDIRDG MKFFFDEGKG YIFPRILREM FKIEEENLDK SELEKREIEL
310 320 330 340 350
GKALLESAIE SINSFKKNGY LGEEFSLRFK NINEMNEFVS FMKKQGGLIE
360 370 380
IREVKKENGE IIAKFLKRKR TEKIIEDIIK RGISPLD
Length:387
Mass (Da):45,316
Last modified:June 13, 2012 - v1
Checksum:i64DD0A545406A30F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003423 Genomic DNA. Translation: AFH43234.1.
RefSeqiYP_005842686.1. NC_017461.1.

Genome annotation databases

EnsemblBacteriaiAFH43234; AFH43234; FFONT_1246.
GeneIDi12450348.
KEGGiffo:FFONT_1246.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003423 Genomic DNA. Translation: AFH43234.1.
RefSeqiYP_005842686.1. NC_017461.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFH43234; AFH43234; FFONT_1246.
GeneIDi12450348.
KEGGiffo:FFONT_1246.

Phylogenomic databases

KOiK07468.
OMAiGYPHIGR.

Enzyme and pathway databases

BioCyciFFON1163730:GLD9-1284-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Fervidicoccus fontis complete genome analysis confirms its distinct phylogenetic position and predicts its environmental function."
    Lebedinsky A.V., Mardanov A.V., Gumerov V.M., Beletsky A.V., Kublanov I.V., Perevalova A.A., Bonch-Osmolovskaya E.A., Ravin N.V., Skryabin K.G.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 19380 / VKM B-2539 / Kam940Imported.

Entry informationi

Entry nameiI0A2M7_FERFK
AccessioniPrimary (citable) accession number: I0A2M7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 4, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.