H9UCV7 (H9UCV7_FERPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Ferpe_1270 EMBL AFG35350.1

Organism

Fervidobacterium pennivorans (strain DSM 9078 / Ven5) [Complete proteome] [HAMAP] EMBL AFG35350.1

Taxonomic identifier

771875 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermotogae › Thermotogae › Thermotogales › Thermotogaceae › Fervidobacterium › Fervidobacterium pennivorans

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H9UCV7 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: F6BF80D2039F6075	FASTA	364	40,889
	10 20 30 40 50 60 MESRRTYAVI NVRNYIDNLR FFQEHCAPAK VMPVVKANAY GHGAVVLSKA AERAGMDYFA 70 80 90 100 110 120 VAFLEEALEL RKHGLKSNIL VFNYIEPDML QIAYKHNIII TLYSWEQLWR YSKEAFKPKC 130 140 150 160 170 180 HVKIDTGMRR LGIPPAEAIE FVKAARKAGF EVEGAYTHFA VADSLEESDV AFTQKQAEEF 190 200 210 220 230 240 SKLDLDVKIK HVCNSGAGIS RVVNCFDYVR VGIASYGLQP GDTVKSDKLK PVLTWKTVVS 250 260 270 280 290 300 HVKTIQPGDT VSYGRTFTAY TEMRIATIPV GYADGYWRSL SNKGYVLIHG EKCPIVGRVC 310 320 330 340 350 360 MDQFMVDVSH LEDVKIGDEV VLIGKQGANQ ITAEEIAKLV GTINYEVTCR ISERVPRKYE GLEL

References

[1]

"Complete sequence of Fervidobacterium pennivorans DSM 9078." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Noll K.M., Woyke T. Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9078 / Ven5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003260 Genomic DNA. Translation: AFG35350.1.
RefSeq	YP_005471469.1. NC_017095.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFG35350; AFG35350; Ferpe_1270.
GeneID	12058018.
KEGG	fpe:Ferpe_1270.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H9UCV7_FERPD

Accession

Primary (citable) accession number: H9UCV7

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)