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H9UBG9 (H9UBG9_FERPD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ferpe_0742 EMBL AFG34862.1
OrganismFervidobacterium pennivorans (strain DSM 9078 / Ven5) [Complete proteome] [HAMAP] EMBL AFG34862.1
Taxonomic identifier771875 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeFervidobacterium

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFG34862.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

D-alanine-D-alanine ligase activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H9UBG9 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 8022BA015BA91AEC

FASTA30234,483
        10         20         30         40         50         60 
MKIAIAYDKS NLDNERWKMV QSVSEALSKK YDAEPVAFED NFCEKVKKYD AVFNLSTAYK 

        70         80         90        100        110        120 
QMHVPAILEV LKIPFTGSSA AAHALCIDKL KTKIILKHFG IPTPDFISVD LDEEVPEIDF 

       130        140        150        160        170        180 
YPAIVKPVKE GSAKGIYADS VVHNHEELKE KVLRVHKEFE QPALVEQFIE GDREYSIGIV 

       190        200        210        220        230        240 
GSKVLPILEI DFSSLPEGLE RFYSHRVKHE YGEQTTYICP AQLTEELKAQ IEHYALKSFK 

       250        260        270        280        290        300 
VLGLRNYARM DLRVKDGKIY FLEANSLPML TPNYSDIIKM AQAAGYTYDE FILTIFEDAL 


RK 

« Hide

References

[1]"Complete sequence of Fervidobacterium pennivorans DSM 9078."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Noll K.M., Woyke T.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9078 / Ven5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003260 Genomic DNA. Translation: AFG34862.1.
RefSeqYP_005470981.1. NC_017095.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFG34862; AFG34862; Ferpe_0742.
GeneID12057491.
KEGGfpe:Ferpe_0742.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

BioCycFPEN771875:GLDA-742-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH9UBG9_FERPD
AccessionPrimary (citable) accession number: H9UBG9
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: May 29, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)