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H9H7X1 (H9H7X1_MONDO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length902 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMODP00000026655

Sequences

Sequence LengthMass (Da)Tools
H9H7X1 [UniParc].

Last modified January 9, 2013. Version 2.
Checksum: 9AC6743D8CA040DC

FASTA902100,543
        10         20         30         40         50         60 
MKWLGDSKNM VVNGRRNGGK LSNEHQPNQS KFQHAGKDAL KAGRNAVERR SSRCSGTSGF 

        70         80         90        100        110        120 
EGQSRYVPSS GMSAKELCEN DDLATSLVLD PYLGFQTHKM NTSAFPWRSS RHFTKPDSCP 

       130        140        150        160        170        180 
HTHSVRFRPI KGRQEELKEV IERFKKDEHL EKAFKCLTSG EWARHYFLNK NKTQERLFKE 

       190        200        210        220        230        240 
HVFIYLRMFA TDSGFEILPC NRYSSEQNGA KIVATKEWKR NDKIELLVGC IAELSEIEEN 

       250        260        270        280        290        300 
MLLRHGENDF SVMYSTRKNC AQLWLGPAAF INHDCRPNCK FVSTGRDTAC VKALRDIEPG 

       310        320        330        340        350        360 
EEISCYYGDG FFGENNEYCE CYTCERRGTG AFKSRVGLPA PAPVINSKYG LRETDKRLNR 

       370        380        390        400        410        420 
LKKLGDSSKN SDSQSVSSNT DADTTQEKTD ATSNRKSSVG VKKSSKNRSL ARPSSSSVSR 

       430        440        450        460        470        480 
IPASSDTTSS KLTPIHNPRV PKKLKRPAIK PLLSKIKLRN QCKRPEQKGT SRKLQVGNLV 

       490        500        510        520        530        540 
LKEPKVVLYK NLPIKKDKTA EGPASATAAS GCLTRHAARE HRQGPVNGAT EQDGGSAYIT 

       550        560        570        580        590        600 
RRSVRTRTNW KETSEPALEP NLSGNSPSTW MGTGPGTDTD TVEPPVGHAV RDQEKAHEAT 

       610        620        630        640        650        660 
SPKGEGRAPK DDISVAKKKS RQGKLLKQFA KAEEPISVLD APEGDEVVPD LISSHSDHGE 

       670        680        690        700        710        720 
SRDRVDGPAS RQDCVPAATG GCSVGTPEHF KTKDNFRTAK SKKKRRITRY DAQLILENSS 

       730        740        750        760        770        780 
GIPKLTLRRR HDSSSKAHDQ DSDGMNASKI SIKLSKDHDK DNSLYVAKLN NGFNSGSGGG 

       790        800        810        820        830        840 
SATKLKIQLK REEESRGPYA EELRGDNGLC CQETLSLLES RMDMDDYSQY EEESAEESSS 

       850        860        870        880        890        900 
SEEDDNDEDD EDDEDEDYED EFEDDFIPLP PAKRLRLIVG KDSIDIDISS RRREDQSLRL 


NA 

« Hide

References

« Hide 'large scale' references
[1]"Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences."
Mikkelsen T.S., Wakefield M.J., Aken B., Amemiya C.T., Chang J.L., Duke S., Garber M., Gentles A.J., Goodstadt L., Heger A., Jurka J., Kamal M., Mauceli E., Searle S.M., Sharpe T., Baker M.L., Batzer M.A., Benos P.V. expand/collapse author list , Belov K., Clamp M., Cook A., Cuff J., Das R., Davidow L., Deakin J.E., Fazzari M.J., Glass J.L., Grabherr M., Greally J.M., Gu W., Hore T.A., Huttley G.A., Kleber M., Jirtle R.L., Koina E., Lee J.T., Mahony S., Marra M.A., Miller R.D., Nicholls R.D., Oda M., Papenfuss A.T., Parra Z.E., Pollock D.D., Ray D.A., Schein J.E., Speed T.P., Thompson K., VandeBerg J.L., Wade C.M., Walker J.A., Waters P.D., Webber C., Weidman J.R., Xie X., Zody M.C., Baldwin J., Abdouelleil A., Abdulkadir J., Abebe A., Abera B., Abreu J., Acer S.C., Aftuck L., Alexander A., An P., Anderson E., Anderson S., Arachi H., Azer M., Bachantsang P., Barry A., Bayul T., Berlin A., Bessette D., Bloom T., Bloom T., Boguslavskiy L., Bonnet C., Boukhgalter B., Bourzgui I., Brown A., Cahill P., Channer S., Cheshatsang Y., Chuda L., Citroen M., Collymore A., Cooke P., Costello M., D'Aco K., Daza R., De Haan G., DeGray S., DeMaso C., Dhargay N., Dooley K., Dooley E., Doricent M., Dorje P., Dorjee K., Dupes A., Elong R., Falk J., Farina A., Faro S., Ferguson D., Fisher S., Foley C.D., Franke A., Friedrich D., Gadbois L., Gearin G., Gearin C.R., Giannoukos G., Goode T., Graham J., Grandbois E., Grewal S., Gyaltsen K., Hafez N., Hagos B., Hall J., Henson C., Hollinger A., Honan T., Huard M.D., Hughes L., Hurhula B., Husby M.E., Kamat A., Kanga B., Kashin S., Khazanovich D., Kisner P., Lance K., Lara M., Lee W., Lennon N., Letendre F., LeVine R., Lipovsky A., Liu X., Liu J., Liu S., Lokyitsang T., Lokyitsang Y., Lubonja R., Lui A., MacDonald P., Magnisalis V., Maru K., Matthews C., McCusker W., McDonough S., Mehta T., Meldrim J., Meneus L., Mihai O., Mihalev A., Mihova T., Mittelman R., Mlenga V., Montmayeur A., Mulrain L., Navidi A., Naylor J., Negash T., Nguyen T., Nguyen N., Nicol R., Norbu C., Norbu N., Novod N., O'Neill B., Osman S., Markiewicz E., Oyono O.L., Patti C., Phunkhang P., Pierre F., Priest M., Raghuraman S., Rege F., Reyes R., Rise C., Rogov P., Ross K., Ryan E., Settipalli S., Shea T., Sherpa N., Shi L., Shih D., Sparrow T., Spaulding J., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Strader C., Tesfaye S., Thomson T., Thoulutsang Y., Thoulutsang D., Topham K., Topping I., Tsamla T., Vassiliev H., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Young G., Yu Q., Zembek L., Zhong D., Zimmer A., Zwirko Z., Jaffe D.B., Alvarez P., Brockman W., Butler J., Chin C., Gnerre S., MacCallum I., Graves J.A., Ponting C.P., Breen M., Samollow P.B., Lander E.S., Lindblad-Toh K.
Nature 447:167-177(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (MAR-2012) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

RefSeqXP_001362478.1. XM_001362441.2.
XP_007505713.1. XM_007505651.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMODT00000027133; ENSMODP00000026655; ENSMODG00000021327.
GeneID100010281.
KEGGmdo:100010281.

Organism-specific databases

CTD51111.

Phylogenomic databases

GeneTreeENSGT00520000055640.
KOK11429.
OMAKLEMGNL.
OrthoDBEOG7MKW6P.
TreeFamTF106433.

Family and domain databases

InterProIPR025790. Hist-Lys_N-MTase_Suvar4-20.
IPR001214. SET_dom.
[Graphical view]
PfamPF00856. SET. 1 hit.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
PROSITEPS51570. SAM_MT43_SUVAR420_2. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH9H7X1_MONDO
AccessionPrimary (citable) accession number: H9H7X1
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: January 9, 2013
Last modified: July 9, 2014
This is version 11 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)