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H8XVW7 (H8XVW7_FLAIG) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H8XVW7 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: E3417FF64A484DCB

FASTA39542,809
        10         20         30         40         50         60 
MAKETFDRSK PHLNIGTIGH VDHGKTTLTA AITKVLADAG LSEAKSFDQI DNAPEEKERG 

        70         80         90        100        110        120 
ITINTSHVEY STANRHYAHV DCPGHADYVK NMVTGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLGRQVGVPR MVVFMNKVDM VDDAELLELV EMEIRDLLSF YQYDGDNGPV VQGSALGALN 

       190        200        210        220        230        240 
GDPKWVATVM ELMEAVDNWI ELPARDVDKP FLMPVEDVFT ITGRGTVATG RIETGVANTG 

       250        260        270        280        290        300 
DAVEIIGMGA DKLTSTITGV EMFRKILDRG EAGDNVGLLL RGIDKADIKR GMVICKPGSV 

       310        320        330        340        350        360 
KPHAKFKAEV YILKKEEGGR HTPFHNNYRP QFYVRTTDVT GTISLPAGRD MVMPGDNLTI 

       370        380        390 
EVELLSAIAL SVGLRFAVRE GGRTVGAGQV TEILD 

« Hide

References

[1]"Complete genome sequence of Flavobacterium indicum GPTSA100-9T, isolated from warm spring water."
Barbier P., Houel A., Loux V., Poulain J., Bernardet J.-F., Touchon M., Duchaud E.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17447 / CIP 109464 / GPTSA100-9.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE774682 Genomic DNA. Translation: CCG54081.1.
RefSeqYP_005358138.1. NC_017025.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG54081; CCG54081; KQS_10780.
GeneID11987569.
KEGGfin:KQS_10780.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycFIND1094466:GLDB-2153-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8XVW7_FLAIG
AccessionPrimary (citable) accession number: H8XVW7
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: June 11, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)