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H8XE96 (H8XE96_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ycgO EMBL CCG48310.1
ORF Names:BANAU_0288 EMBL CCG48310.1
OrganismBacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 EMBL CCG48310.1
Taxonomic identifier1155777 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processTransport RuleBase RU003736
   Cellular componentMembrane
   DomainTransmembrane RuleBase RU003736
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionproline:sodium symporter activity

Inferred from electronic annotation. Source: InterPro

sodium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H8XE96 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 248A6114A63CB99F

FASTA48452,414
        10         20         30         40         50         60 
MIISICIYMA GMLFIGYFAY RRTSNLTDYM LGGRSLGPAV TALSAGAADM SGWLLMGLPG 

        70         80         90        100        110        120 
AMFSTGLSGA WIVLGLVLGA WANWLFVAPR LRTYTEKAGN SITIPGFLEN RFGDHTKLLR 

       130        140        150        160        170        180 
LFSGLVILVF FTFYVSSGMV SGGVLFNSIL GLNYHTGLWV VTGVVVAYTL FGGFLAVSWT 

       190        200        210        220        230        240 
DFVQGIIMFA ALILVPIVTI FHTGGPGETV ADIRSVNPEL FNMFKGTTVL GIISLFAWGL 

       250        260        270        280        290        300 
GYFGQPHIIV RFMAITSVKE IKRARRIGMG WMILSALGAL FTGLAGIAYY HQHGLKLADP 

       310        320        330        340        350        360 
ETIFIQLGNI LFHPIITGFL ISAILAAIMS TISSQLLVTS SSLVEDLYKS MFRRSASDKE 

       370        380        390        400        410        420 
LVFLGRMAVL AVSIIALVLA WEKNNTILGL VSYAWAGFGA SFGPVVLLSL FWKRMTKWGA 

       430        440        450        460        470        480 
LAGMIAGAIT VIIWANAGLS DFLYEIIPGF AVSLAAVFVV SLLTQAPSKD VTDQFHDYRD 


TLSQ 

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References

[1]"The Genome of Plant Growth-Promoting Bacillus amyloliquefaciens subsp. plantarum Strain YAU B9601-Y2 Contains a Gene Cluster for Mersacidin Synthesis."
Hao K., He P., Blom J., Rueckert C., Mao Z., Wu Y., He Y., Borriss R.
J. Bacteriol. 194:3264-3265(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: YAU B9601-Y2 EMBL CCG48310.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE774679 Genomic DNA. Translation: CCG48310.1.
RefSeqYP_005419626.1. NC_017061.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG48310; CCG48310; BANAU_0288.
GeneID12208953.
KEGGbya:BANAU_0288.

Phylogenomic databases

KOK11928.

Family and domain databases

InterProIPR011851. Na/Pro_symporter.
IPR001734. Na/solute_symporter.
IPR018212. Na/solute_symporter_CS.
IPR019900. Na/solute_symporter_subgr.
[Graphical view]
PANTHERPTHR11819. PTHR11819. 1 hit.
PfamPF00474. SSF. 1 hit.
[Graphical view]
TIGRFAMsTIGR02121. Na_Pro_sym. 1 hit.
TIGR00813. sss. 1 hit.
PROSITEPS00456. NA_SOLUT_SYMP_1. 1 hit.
PS00457. NA_SOLUT_SYMP_2. 1 hit.
PS50283. NA_SOLUT_SYMP_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8XE96_BACAM
AccessionPrimary (citable) accession number: H8XE96
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)