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H8XDA2 (H8XDA2_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H8XDA2 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 8B09B1C7605A768C

FASTA39643,413
        10         20         30         40         50         60 
MAKEKFDRSK SHANIGTIGH VDHGKTTLTA AISTVLHKKS GKGTAMAYDQ IDGAPEERER 

        70         80         90        100        110        120 
GITISTAHVE YETDTRHYAH VDCPGHADYV KNMITGAAQM DGAILVVSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLSKNVGVP YIVVFLNKCD MVDDEELLEL VEMEVRDLLS EYDFPGDDVP VVKGSALKAL 

       190        200        210        220        230        240 
EGDAEYEEKI LELMAAVDEY IPTPERDTDK PFMMPVEDVF SITGRGTVAT GRVERGQVKV 

       250        260        270        280        290        300 
GDEVEIIGLQ EENSKTTVTG VEMFRKLLDY AEAGDNIGAL LRGVAREDIQ RGQVLAKPGT 

       310        320        330        340        350        360 
ITPHSKFKAE VYVLSKEEGG RHTPFFSNYR PQFYFRTTDV TGIINLPEGV EMVMPGDNTE 

       370        380        390 
MIVELISTIA IEEGTRFSIR EGGRTVGSGV VSTITE 

« Hide

References

[1]"The Genome of Plant Growth-Promoting Bacillus amyloliquefaciens subsp. plantarum Strain YAU B9601-Y2 Contains a Gene Cluster for Mersacidin Synthesis."
Hao K., He P., Blom J., Rueckert C., Mao Z., Wu Y., He Y., Borriss R.
J. Bacteriol. 194:3264-3265(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: YAU B9601-Y2 EMBL CCG48134.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE774679 Genomic DNA. Translation: CCG48134.1.
RefSeqYP_005419450.1. NC_017061.1.

3D structure databases

ProteinModelPortalH8XDA2.
SMRH8XDA2. Positions 2-394.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEH8XDA2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG48134; CCG48134; BANAU_0112.
GeneID12206145.
KEGGbya:BANAU_0112.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycBAMY1155777:GL8E-140-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8XDA2_BACAM
AccessionPrimary (citable) accession number: H8XDA2
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)