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Protein

Superoxide dismutase

Gene

sodM

Organism
Chlamydia trachomatis F/SW5
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciCTRA1071763:GLAX-307-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodMImported
ORF Names:FSW5_2961Imported
OrganismiChlamydia trachomatis F/SW5Imported
Taxonomic identifieri1071763 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
ProteomesiUP000007603: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8WN95-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVFSSYMLPA LPYDYDALEP VISAEIMQLH HQKHHQGYIN NLNEALKSLD
60 70 80 90 100
VANATQDLTR LIAINPALRF NGGSHINHSL FWEMLAPQGK GGGVPPRHEL
110 120 130 140 150
LKLIEKFWGS FDNFLKNFIT SSAAVQGSGW GWLAFCPQKQ ELMVQTTANQ
160 170 180 190 200
DPLEATTGMI PLLGVDVWEH AYYLQYKNAR MGYLQSFPSI INWDYIENRF

VEMSKQ
Length:206
Mass (Da):23,447
Last modified:May 16, 2012 - v1
Checksum:i95ECA611DCCB87F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601805 Genomic DNA. Translation: CCE14347.1.
RefSeqiYP_006361976.1. NC_017953.1.

Genome annotation databases

EnsemblBacteriaiCCE14347; CCE14347; FSW5_2961.
GeneIDi13014603.
KEGGicfw:FSW5_2961.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601805 Genomic DNA. Translation: CCE14347.1.
RefSeqiYP_006361976.1. NC_017953.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCE14347; CCE14347; FSW5_2961.
GeneIDi13014603.
KEGGicfw:FSW5_2961.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciCTRA1071763:GLAX-307-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Seth-Smith H.
    Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F/SW5Imported.
  2. "Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing."
    Harris S.R., Clarke I.N., Seth-Smith H.M.B., Solomon A.W., Cutcliffe L.T., Marsh P., Skilton R.J., Holland M.J., Mabey D., Peeling R.W., Lewis D.A., Spratt B.G., Unemo M., Persson K., Bjartling C., Brunham R., de Vries H.J., Morre S.A.
    , Speksnijder A., Bebebar C.M., Clerc M., de Barbeyrac B., Parkhill J., Thomson N.R.
    Nat. Genet. 44:413-419(2012)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F/SW5Imported.

Entry informationi

Entry nameiH8WN95_CHLTH
AccessioniPrimary (citable) accession number: H8WN95
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.