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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

Q7S_22976

Organism
Rahnella aquatilis HX2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei235 – 2351NucleophileUniRule annotation
Active sitei265 – 2651Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-4583-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
ORF Names:Q7S_22976Imported
Encoded oniPlasmid PRA1Imported
OrganismiRahnella aquatilis HX2Imported
Taxonomic identifieri1151116 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007594: Plasmid PRA1

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

H8NZR7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQNPTLFQFF HWYYPDGGKL WPEVAEKAAW LAEIGITAAW LPPAYKGESG
60 70 80 90 100
GYSVGYDTYD LFDLGEFEQK GSRATKYGDK EGLLAAIGAL KQHKLGVILD
110 120 130 140 150
VVLNHKMGAD EKERVQVNRV NIDNREEISD DIIEAEAWTR FIFAAREGRY
160 170 180 190 200
SKFIWDFHCF SGVDHIENPD EQGIFKIVND YTGGGWNDQV DDEFGNYDYL
210 220 230 240 250
MGANVDFRNN AVSEELKYWG RWIMEQTNCT GFRLDAVKHI PAWFYKEWID
260 270 280 290 300
HIQAEAEQPM YLVAEYWSFD VQTLQNYIHQ VEGKTMLFDA PLQLNFHHAS
310 320 330 340 350
KQGADFDLTT IFDNTLVAAD AEHAVTLVAN HDTQPLQSLE APVEPWFKPL
360 370 380 390 400
AYALILLREQ GVPIIFYPDL FGASYEDEGD DGNNYTIELP AIVPLEALIR
410 420 430 440 450
ARQRYAWGAQ TDYFDHPNCI AFSRSGTAEH PGCVVVMSNG EAGEKTIDLG
460 470 480 490
DNFAGKKWRD VLENREDIIT TDEQGSAQFY CAAGSVSVWT LAE
Length:493
Mass (Da):55,938
Last modified:May 16, 2012 - v1
Checksum:i92DCE6FC499D07CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003404 Genomic DNA. Translation: AFE60757.1.
RefSeqiYP_005418861.1. NC_017060.1.

Genome annotation databases

EnsemblBacteriaiAFE60757; AFE60757; Q7S_22976.
GeneIDi12019237.
KEGGiraa:Q7S_22976.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003404 Genomic DNA. Translation: AFE60757.1.
RefSeqiYP_005418861.1. NC_017060.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFE60757; AFE60757; Q7S_22976.
GeneIDi12019237.
KEGGiraa:Q7S_22976.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-4583-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
    Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
    J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HX2Imported.

Entry informationi

Entry nameiH8NZR7_RAHAQ
AccessioniPrimary (citable) accession number: H8NZR7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: February 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.