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H8NRD4

- H8NRD4_RAHAQ

UniProt

H8NRD4 - H8NRD4_RAHAQ

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Protein

Xylose isomerase

Gene

Q7S_04675

Organism
Rahnella aquatilis HX2
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-954-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
ORF Names:Q7S_04675Imported
OrganismiRahnella aquatilis HX2Imported
Taxonomic identifieri1151116 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007594: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliH8NRD4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8NRD4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLQMIERAAT VKGLTHLDLN YPQHMTGDIT LMRQKIEEVG LAVNGMQMRW
60 70 80 90 100
DAPEFKIGAF THPDPKIRRQ AIELTKRGID AGREFGASIM TLWMGQDGFD
110 120 130 140 150
YCFQADYKKI WEDAVSAVRE VAEYAPDIDV SIEYKPNEPR AYSIFPNATT
160 170 180 190 200
CLLAVEEAGC KNLGITLDFA HVLFANEVPA FAAAMVARRS RLLGLDLNDG
210 220 230 240 250
WGKRDDGLMV GSVNPRATLE FLLQMKRDGY KGAYYFDTFP DASGLDPVRE
260 270 280 290
AETNIATVIR LLKLCEKLEN NPALNEAISR QDAVATQQIV NDVMLAQ
Length:297
Mass (Da):33,184
Last modified:May 16, 2012 - v1
Checksum:i8B3270FE0C4BC532
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1.
RefSeqiYP_005400758.1. NC_017047.1.

Genome annotation databases

EnsemblBacteriaiAFE57191; AFE57191; Q7S_04675.
GeneIDi12004589.
KEGGiraa:Q7S_04675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1 .
RefSeqi YP_005400758.1. NC_017047.1.

3D structure databases

ProteinModelPortali H8NRD4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFE57191 ; AFE57191 ; Q7S_04675 .
GeneIDi 12004589.
KEGGi raa:Q7S_04675.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci RAQU1151116:GLJ4-954-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
    Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
    J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HX2Imported.

Entry informationi

Entry nameiH8NRD4_RAHAQ
AccessioniPrimary (citable) accession number: H8NRD4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3