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H8NRD4

- H8NRD4_RAHAQ

UniProt

H8NRD4 - H8NRD4_RAHAQ

Protein

Xylose isomerase

Gene

Q7S_04675

Organism
Rahnella aquatilis HX2
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (16 May 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. xylose isomerase activity Source: UniProtKB-EC

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-KW
    2. pentose-phosphate shunt Source: UniProtKB-KW

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciRAQU1151116:GLJ4-954-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    ORF Names:Q7S_04675Imported
    OrganismiRahnella aquatilis HX2Imported
    Taxonomic identifieri1151116 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
    ProteomesiUP000007594: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliH8NRD4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51658. SSF51658. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H8NRD4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLQMIERAAT VKGLTHLDLN YPQHMTGDIT LMRQKIEEVG LAVNGMQMRW    50
    DAPEFKIGAF THPDPKIRRQ AIELTKRGID AGREFGASIM TLWMGQDGFD 100
    YCFQADYKKI WEDAVSAVRE VAEYAPDIDV SIEYKPNEPR AYSIFPNATT 150
    CLLAVEEAGC KNLGITLDFA HVLFANEVPA FAAAMVARRS RLLGLDLNDG 200
    WGKRDDGLMV GSVNPRATLE FLLQMKRDGY KGAYYFDTFP DASGLDPVRE 250
    AETNIATVIR LLKLCEKLEN NPALNEAISR QDAVATQQIV NDVMLAQ 297
    Length:297
    Mass (Da):33,184
    Last modified:May 16, 2012 - v1
    Checksum:i8B3270FE0C4BC532
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003403 Genomic DNA. Translation: AFE57191.1.
    RefSeqiWP_015689459.1. NC_017047.1.
    YP_005400758.1. NC_017047.1.

    Genome annotation databases

    EnsemblBacteriaiAFE57191; AFE57191; Q7S_04675.
    GeneIDi12004589.
    KEGGiraa:Q7S_04675.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003403 Genomic DNA. Translation: AFE57191.1 .
    RefSeqi WP_015689459.1. NC_017047.1.
    YP_005400758.1. NC_017047.1.

    3D structure databases

    ProteinModelPortali H8NRD4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFE57191 ; AFE57191 ; Q7S_04675 .
    GeneIDi 12004589.
    KEGGi raa:Q7S_04675.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci RAQU1151116:GLJ4-954-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51658. SSF51658. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
      Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
      J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HX2Imported.

    Entry informationi

    Entry nameiH8NRD4_RAHAQ
    AccessioniPrimary (citable) accession number: H8NRD4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 16, 2012
    Last sequence update: May 16, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3