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H8NRD4 (H8NRD4_RAHAQ) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Xylose isomerase RuleBase RU000609

EC=5.3.1.5 RuleBase RU000609
Gene names
ORF Names:Q7S_04675 EMBL AFE57191.1
OrganismRahnella aquatilis HX2 [Complete proteome] EMBL AFE57191.1
Taxonomic identifier1151116 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 SAAS SAAS001998

Subunit structure

Homotetramer By similarity. RuleBase RU000610

Subcellular location

Cytoplasm By similarity RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609

Sequences

Sequence LengthMass (Da)Tools
H8NRD4 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 8B3270FE0C4BC532

FASTA29733,184
        10         20         30         40         50         60 
MLQMIERAAT VKGLTHLDLN YPQHMTGDIT LMRQKIEEVG LAVNGMQMRW DAPEFKIGAF 

        70         80         90        100        110        120 
THPDPKIRRQ AIELTKRGID AGREFGASIM TLWMGQDGFD YCFQADYKKI WEDAVSAVRE 

       130        140        150        160        170        180 
VAEYAPDIDV SIEYKPNEPR AYSIFPNATT CLLAVEEAGC KNLGITLDFA HVLFANEVPA 

       190        200        210        220        230        240 
FAAAMVARRS RLLGLDLNDG WGKRDDGLMV GSVNPRATLE FLLQMKRDGY KGAYYFDTFP 

       250        260        270        280        290 
DASGLDPVRE AETNIATVIR LLKLCEKLEN NPALNEAISR QDAVATQQIV NDVMLAQ 

« Hide

References

[1]"Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HX2 EMBL AFE57191.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003403 Genomic DNA. Translation: AFE57191.1.
RefSeqYP_005400758.1. NC_017047.1.

3D structure databases

ProteinModelPortalH8NRD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFE57191; AFE57191; Q7S_04675.
GeneID12004589.
KEGGraa:Q7S_04675.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycRAQU1151116:GLJ4-954-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. SSF51658. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8NRD4_RAHAQ
AccessionPrimary (citable) accession number: H8NRD4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: March 19, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)