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Protein
Submitted name:

Xylose isomerase domain-containing protein TIM barrel

Gene

Q7S_04675

Organism
Rahnella aquatilis HX2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-954-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Xylose isomerase domain-containing protein TIM barrelImported
Gene namesi
ORF Names:Q7S_04675Imported
OrganismiRahnella aquatilis HX2Imported
Taxonomic identifieri1151116 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeRahnella
Proteomesi
  • UP000007594 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH8NRD4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 211AP_endonuc_2InterPro annotationAdd BLAST191

Phylogenomic databases

KOiK01805.
OrthoDBiPOG091H09MM.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8NRD4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQMIERAAT VKGLTHLDLN YPQHMTGDIT LMRQKIEEVG LAVNGMQMRW
60 70 80 90 100
DAPEFKIGAF THPDPKIRRQ AIELTKRGID AGREFGASIM TLWMGQDGFD
110 120 130 140 150
YCFQADYKKI WEDAVSAVRE VAEYAPDIDV SIEYKPNEPR AYSIFPNATT
160 170 180 190 200
CLLAVEEAGC KNLGITLDFA HVLFANEVPA FAAAMVARRS RLLGLDLNDG
210 220 230 240 250
WGKRDDGLMV GSVNPRATLE FLLQMKRDGY KGAYYFDTFP DASGLDPVRE
260 270 280 290
AETNIATVIR LLKLCEKLEN NPALNEAISR QDAVATQQIV NDVMLAQ
Length:297
Mass (Da):33,184
Last modified:May 16, 2012 - v1
Checksum:i8B3270FE0C4BC532
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1.

Genome annotation databases

EnsemblBacteriaiAFE57191; AFE57191; Q7S_04675.
KEGGiraa:Q7S_04675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1.

3D structure databases

ProteinModelPortaliH8NRD4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFE57191; AFE57191; Q7S_04675.
KEGGiraa:Q7S_04675.

Phylogenomic databases

KOiK01805.
OrthoDBiPOG091H09MM.

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-954-MONOMER.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiH8NRD4_RAHAQ
AccessioniPrimary (citable) accession number: H8NRD4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: November 30, 2016
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.