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H8NRD4

- H8NRD4_RAHAQ

UniProt

H8NRD4 - H8NRD4_RAHAQ

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Protein
Xylose isomerase
Gene
Q7S_04675
Organism
Rahnella aquatilis HX2
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-954-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
ORF Names:Q7S_04675Imported
OrganismiRahnella aquatilis HX2Imported
Taxonomic identifieri1151116 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007594: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliH8NRD4.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8NRD4-1 [UniParc]FASTAAdd to Basket

« Hide

MLQMIERAAT VKGLTHLDLN YPQHMTGDIT LMRQKIEEVG LAVNGMQMRW    50
DAPEFKIGAF THPDPKIRRQ AIELTKRGID AGREFGASIM TLWMGQDGFD 100
YCFQADYKKI WEDAVSAVRE VAEYAPDIDV SIEYKPNEPR AYSIFPNATT 150
CLLAVEEAGC KNLGITLDFA HVLFANEVPA FAAAMVARRS RLLGLDLNDG 200
WGKRDDGLMV GSVNPRATLE FLLQMKRDGY KGAYYFDTFP DASGLDPVRE 250
AETNIATVIR LLKLCEKLEN NPALNEAISR QDAVATQQIV NDVMLAQ 297
Length:297
Mass (Da):33,184
Last modified:May 16, 2012 - v1
Checksum:i8B3270FE0C4BC532
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1.
RefSeqiWP_015689459.1. NC_017047.1.
YP_005400758.1. NC_017047.1.

Genome annotation databases

EnsemblBacteriaiAFE57191; AFE57191; Q7S_04675.
GeneIDi12004589.
KEGGiraa:Q7S_04675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003403 Genomic DNA. Translation: AFE57191.1 .
RefSeqi WP_015689459.1. NC_017047.1.
YP_005400758.1. NC_017047.1.

3D structure databases

ProteinModelPortali H8NRD4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFE57191 ; AFE57191 ; Q7S_04675 .
GeneIDi 12004589.
KEGGi raa:Q7S_04675.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci RAQU1151116:GLJ4-954-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
    Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
    J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HX2Imported.

Entry informationi

Entry nameiH8NRD4_RAHAQ
AccessioniPrimary (citable) accession number: H8NRD4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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