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Protein

Superoxide dismutase

Gene

Q7S_00200

Organism
Rahnella aquatilis HX2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-40-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:Q7S_00200Imported
OrganismiRahnella aquatilis HX2Imported
Taxonomic identifieri1151116 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007594 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH8NM04.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8NM04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYSLPSLPY AYDALEPHFD KETMEIHHTK HHQAYVNNAN AALESLPELA
60 70 80 90 100
ALPVEELITK LDQVPADKKV ALRNNAGGHA NHSLFWKGLK TGTTLQGELK
110 120 130 140 150
SAIERDFGSV DAFKETFEKA ATTRFGSGWA WLVLKDGKLA VVSTANQDSP
160 170 180 190 200
LMGEAISGAS GYPLLGLDVW EHAYYLKYQN KRPDYIKAFW AVVNWDEAAK

RLAEAK
Length:206
Mass (Da):22,876
Last modified:May 16, 2012 - v1
Checksum:i4706DAFECB88B7AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003403 Genomic DNA. Translation: AFE56312.1.
RefSeqiYP_005399879.1. NC_017047.1.

Genome annotation databases

EnsemblBacteriaiAFE56312; AFE56312; Q7S_00200.
KEGGiraa:Q7S_00200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003403 Genomic DNA. Translation: AFE56312.1.
RefSeqiYP_005399879.1. NC_017047.1.

3D structure databases

ProteinModelPortaliH8NM04.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFE56312; AFE56312; Q7S_00200.
KEGGiraa:Q7S_00200.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciRAQU1151116:GLJ4-40-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Draft Genome Sequence of Rahnella aquatilis Strain HX2, a Plant Growth-Promoting Rhizobacterium Isolated from Vineyard Soil in Beijing, China."
    Guo Y., Jiao Z., Li L., Wu D., Crowley D.E., Wang Y., Wu W.
    J. Bacteriol. 194:6646-6647(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HX2Imported.

Entry informationi

Entry nameiH8NM04_RAHAQ
AccessioniPrimary (citable) accession number: H8NM04
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 1, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.