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H8N1U5 (H8N1U5_CORCM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H8N1U5 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 5F6E2653D2425339

FASTA54964,580
        10         20         30         40         50         60 
MDLDPLWYKK ALIYELHIRA FHDSNGDGHG DIPGLIEKLP YLQDLGVDCL WLLPHYPSPL 

        70         80         90        100        110        120 
RDDGYDIADY YGIHPDYGTL ADFQRLVEEA HKRGLRIIIE LVVNHTSDQH PWFQEARRDP 

       130        140        150        160        170        180 
KSPKRNWYVW SDTDESYKGA RIIFTDTERS NWTWDPVAKQ YFWHRFFSHQ PDLNYDNPEV 

       190        200        210        220        230        240 
QEAMLDVMRF WLNMGVDGFR CDAVPYLFER EGTNCENLPE THAFLKRLRK TIDSEYQGKV 

       250        260        270        280        290        300 
LLAEANQWPA DVRVYFGEGD EFHMGFHFPV MPRLFMAVRR EDRTPIVEIM QQTPDIPDTC 

       310        320        330        340        350        360 
QWAIFLRNHD ELTLEMVTDE DRDYMYREYA TDPRMRINLG IRRRLAPLMD NGRRRIELMH 

       370        380        390        400        410        420 
SLLFTLPGTP VLYYGDEIGM GDNIYLGDRN GVRTPMQWTG DRNAGFSRAD YARLFAPVIA 

       430        440        450        460        470        480 
DPVYGYQSIN VEAQERQKSS LLQWVKRMIG IRQRYPVFAM GSLRFLTTEN RKVLAFVREW 

       490        500        510        520        530        540 
EGQTVLVVCN LSRFAQPGVL DLREFEGSIP VELIGETPFP RISELPYQLS MGPYMFLWFR 


LDKPVQAKE 

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References

[1]"Genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259."
Huntley S., Zhang Y., Treuner-Lange A., Sensen C.W., Sogaard-Andersen L.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25202 / DSM 2259 / NBRC 100086 / M2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003389 Genomic DNA. Translation: AFE10527.1.
RefSeqYP_005370303.1. NC_017030.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFE10527; AFE10527; COCOR_04333.
GeneID11982216.
KEGGccx:COCOR_04333.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Enzyme and pathway databases

BioCycCCOR1144275:GLBO-4337-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8N1U5_CORCM
AccessionPrimary (citable) accession number: H8N1U5
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 16, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)