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H8MW57 (H8MW57_CORCM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length532 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H8MW57 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 827EA26A52F31DA6

FASTA53260,476
        10         20         30         40         50         60 
MRALADLYDT LDQTTSTNAK VEAMARYFRT APPEDAAWGL FFLTGQKLKR LLTSKLLAGW 

        70         80         90        100        110        120 
TMELTGVPDW LFDEVYASVG DLAEVIALLL DGANLPPEHA EELPLSRWLE ERLLPLRGLD 

       130        140        150        160        170        180 
AAEQRERVVG WWKSMPRREL FLLNKMLTGE LRVGVSNTLV VRAIAQVTGL PPPSVAHRLM 

       190        200        210        220        230        240 
GTWTPTKAFF EQLVAPDVSD GHVSRPYPYY LASPLEQPAE SLGELSDWLV EWKWDGIRGQ 

       250        260        270        280        290        300 
LIRRQGDVFL WSRGEELITE RFPEITEAAR ALPEGTVLDG EVMAYEDGVP LPFARLQRRI 

       310        320        330        340        350        360 
GRQKLTPKVL AEAPAAFVVY DLLEQDGKDL RELPLRERRA RLEALLKDHP RFPISPTVTA 

       370        380        390        400        410        420 
SSWEALAELR KESRARNVEG LMIKRLDSVY QTGRKRGDWW KWKIDPYTVD AVLLYAHPGH 

       430        440        450        460        470        480 
GRRSSLYTDY TFAVWNGEDL LPVTKAYSGL TDEEIGKLDR WIRAHTREKF GPVRSVDPEQ 

       490        500        510        520        530 
VFELHFEAIA PSPRHKSGIA LRFPRIARWR ADKTARDADT LDSLKGLLHA AH 

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References

[1]"Genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259."
Huntley S., Zhang Y., Treuner-Lange A., Sensen C.W., Sogaard-Andersen L.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25202 / DSM 2259 / NBRC 100086 / M2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003389 Genomic DNA. Translation: AFE09217.1.
RefSeqYP_005372555.1. NC_017030.1.

3D structure databases

ProteinModelPortalH8MW57.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFE09217; AFE09217; COCOR_06602.
GeneID11983205.
KEGGccx:COCOR_06602.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycCCOR1144275:GLBO-6606-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8MW57_CORCM
AccessionPrimary (citable) accession number: H8MW57
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)