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Protein

ATP-dependent 6-phosphofructokinase

Gene

pfkA1

Organism
Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.UniRule annotation

Catalytic activityi

ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate.UniRule annotation

Cofactori

Mg2+UniRule annotation

Pathwayi: glycolysis

This protein is involved in step 3 of the subpathway that synthesizes D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose.UniRule annotationSAAS annotation
Proteins known to be involved in the 4 steps of the subpathway in this organism are:
  1. no protein annotated in this organism
  2. Glucose-6-phosphate isomerase (pgi)
  3. ATP-dependent 6-phosphofructokinase (pfkA1), ATP-dependent 6-phosphofructokinase (pfkA)
  4. Fructose-bisphosphate aldolase (COCOR_01449)
This subpathway is part of the pathway glycolysis, which is itself part of Carbohydrate degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose, the pathway glycolysis and in Carbohydrate degradation.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei14 – 141ATP; via amide nitrogenUniRule annotation
Metal bindingi119 – 1191Magnesium; catalyticUniRule annotation
Sitei120 – 1201Important for substrate specificity; cannot use PPi as phosphoryl donorUniRule annotation
Active sitei143 – 1431Proton acceptorUniRule annotation
Binding sitei178 – 1781Substrate; shared with dimeric partnerUniRule annotation
Binding sitei238 – 2381SubstrateUniRule annotation
Binding sitei284 – 2841Substrate; shared with dimeric partnerUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi78 – 792ATPUniRule annotation
Nucleotide bindingi118 – 1214ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationSAAS annotationImported, Transferase

Keywords - Biological processi

GlycolysisUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciCCOR1144275:GLBO-3928-MONOMER.
UniPathwayiUPA00109; UER00182.

Names & Taxonomyi

Protein namesi
Recommended name:
ATP-dependent 6-phosphofructokinaseUniRule annotation (EC:2.7.1.11UniRule annotation)
Short name:
ATP-PFKUniRule annotation
Short name:
PhosphofructokinaseUniRule annotation
Alternative name(s):
PhosphohexokinaseUniRule annotation
Gene namesi
Name:pfkA1Imported
Synonyms:pfkAUniRule annotation
Ordered Locus Names:COCOR_03924Imported
OrganismiCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)Imported
Taxonomic identifieri1144275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeCorallococcus
Proteomesi
  • UP000007587 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homodimer or homotetramer.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 315310PFKInterPro annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni141 – 1433Substrate bindingUniRule annotation
Regioni185 – 1873Substrate bindingUniRule annotation
Regioni290 – 2934Substrate bindingUniRule annotation

Sequence similaritiesi

Belongs to the phosphofructokinase type A (PFKA) family.SAAS annotation
Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.UniRule annotation

Phylogenomic databases

KOiK00850.
OMAiCRIRERI.

Family and domain databases

HAMAPiMF_01976. Phosphofructokinase_III.
InterProiIPR022953. ATP_PFK.
IPR012003. ATP_PFK_prok-type.
IPR015912. Phosphofructokinase_CS.
IPR000023. Phosphofructokinase_dom.
IPR012829. Phosphofructokinase_III.
[Graphical view]
PfamiPF00365. PFK. 1 hit.
[Graphical view]
PIRSFiPIRSF000532. ATP_PFK_prok. 1 hit.
PRINTSiPR00476. PHFRCTKINASE.
SUPFAMiSSF53784. SSF53784. 1 hit.
TIGRFAMsiTIGR02483. PFK_mixed. 1 hit.
PROSITEiPS00433. PHOSPHOFRUCTOKINASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8MU13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARPLRLGVL TGGGDCPGLN ALIRGLVRRG VHEFDHSFVG IENGYMGLVE
60 70 80 90 100
PELVRPLGVE DTRGILPKGG TILGTSNKAN PFSYPVREGT GWVERDVSDQ
110 120 130 140 150
VLRRCEELRL DGLVAIGGDG TLSIAHQLAD KGLKVVGCPK TIDNDLSGTD
160 170 180 190 200
QTFGFDTARL IVTEALDRLH STAEAHDRVM VVEIMGRHAG FLTLESGIAG
210 220 230 240 250
GADVILIPEI PYRVESVLET LKRRATRRRS FSIIAISEGA YPEGGALSVL
260 270 280 290 300
AEAADIPGRG VVRLGGSGKV CADLLARHID AEIRVTVLGH LQRGGSPSAA
310 320 330 340 350
DRVLATRYGC KVLDLVRDGQ WGHMVALRNN EVVPVPLSES RKERRVDVQG
360
DLVRFARSMG IGFGD
Length:365
Mass (Da):39,160
Last modified:May 16, 2012 - v1
Checksum:i1012A805C7E4A62F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003389 Genomic DNA. Translation: AFE09787.1.
RefSeqiWP_014396736.1. NC_017030.1.

Genome annotation databases

EnsemblBacteriaiAFE09787; AFE09787; COCOR_03924.
KEGGiccx:COCOR_03924.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003389 Genomic DNA. Translation: AFE09787.1.
RefSeqiWP_014396736.1. NC_017030.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFE09787; AFE09787; COCOR_03924.
KEGGiccx:COCOR_03924.

Phylogenomic databases

KOiK00850.
OMAiCRIRERI.

Enzyme and pathway databases

UniPathwayiUPA00109; UER00182.
BioCyciCCOR1144275:GLBO-3928-MONOMER.

Family and domain databases

HAMAPiMF_01976. Phosphofructokinase_III.
InterProiIPR022953. ATP_PFK.
IPR012003. ATP_PFK_prok-type.
IPR015912. Phosphofructokinase_CS.
IPR000023. Phosphofructokinase_dom.
IPR012829. Phosphofructokinase_III.
[Graphical view]
PfamiPF00365. PFK. 1 hit.
[Graphical view]
PIRSFiPIRSF000532. ATP_PFK_prok. 1 hit.
PRINTSiPR00476. PHFRCTKINASE.
SUPFAMiSSF53784. SSF53784. 1 hit.
TIGRFAMsiTIGR02483. PFK_mixed. 1 hit.
PROSITEiPS00433. PHOSPHOFRUCTOKINASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259."
    Huntley S., Zhang Y., Treuner-Lange A., Sensen C.W., Sogaard-Andersen L.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25202 / DSM 2259 / NBRC 100086 / M2Imported.

Entry informationi

Entry nameiH8MU13_CORCM
AccessioniPrimary (citable) accession number: H8MU13
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: June 8, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.