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Protein
Submitted name:

D-alanine--D-alanine ligase

Gene

ddlB

Organism
Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. D-alanine-D-alanine ligase activity Source: InterPro
  3. metal ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCCOR1144275:GLBO-5186-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligaseImported
Gene namesi
Name:ddlBImported
Ordered Locus Names:COCOR_05182Imported
OrganismiCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)Imported
Taxonomic identifieri1144275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeCorallococcus
ProteomesiUP000007587 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01921.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8MST5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVKSLRIAL LHYQAKDDPP DPVVEQVGAA LRAAGHDTLD VRVDESVSDL
60 70 80 90 100
VQKLTRTRAD LVFNLCETFA EDYRLEVNVA AVLELARMPF TGAGTAGLLL
110 120 130 140 150
AQDKVLTKQL LQFHGVLTPR FATFDGTSFQ TSGDLSFPLV VKPARSDASM
160 170 180 190 200
GLGVEKDMEG LARRVKKIRQ EYDDEALAEE YIEGRELYMG VVGDAAAPEV
210 220 230 240 250
LPVVELDFGS RWNRKRMKIA NREVKFGPET PGSPHLVLPR DLSDELRGRL
260 270 280 290 300
ERAAVTAFRA LKLRDYARID FRVSSRTNEP YLLEVNPNPY LETQCEVAMG
310 320 330 340
AKERGLGYEA LVQRIVDTAA RRHGLGVGSR ATVGAPAREP APAPH
Length:345
Mass (Da):38,044
Last modified:May 16, 2012 - v1
Checksum:iDC22D84C733D98BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003389 Genomic DNA. Translation: AFE08538.1.
RefSeqiWP_014397975.1. NC_017030.1.
YP_005371138.1. NC_017030.1.

Genome annotation databases

EnsemblBacteriaiAFE08538; AFE08538; COCOR_05182.
KEGGiccx:COCOR_05182.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003389 Genomic DNA. Translation: AFE08538.1.
RefSeqiWP_014397975.1. NC_017030.1.
YP_005371138.1. NC_017030.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFE08538; AFE08538; COCOR_05182.
KEGGiccx:COCOR_05182.

Phylogenomic databases

KOiK01921.

Enzyme and pathway databases

BioCyciCCOR1144275:GLBO-5186-MONOMER.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259."
    Huntley S., Zhang Y., Treuner-Lange A., Sensen C.W., Sogaard-Andersen L.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25202 / DSM 2259 / NBRC 100086 / M2Imported.

Entry informationi

Entry nameiH8MST5_CORCM
AccessioniPrimary (citable) accession number: H8MST5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 29, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.