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H8MSG9

- H8MSG9_CORCM

UniProt

H8MSG9 - H8MSG9_CORCM

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Protein
Submitted name: D-alanine--D-alanine ligase
Gene
ddlA, COCOR_03852
Organism
Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cell wall formation By similarity.SAAS annotations

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotations

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: InterPro
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  2. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationsImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotations, Peptidoglycan synthesisSAAS annotations

Keywords - Ligandi

ATP-bindingSAAS annotations, MagnesiumSAAS annotations, ManganeseSAAS annotations, Metal-bindingSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciCCOR1144275:GLBO-3856-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligaseImported
Gene namesi
Name:ddlAImported
Ordered Locus Names:COCOR_03852Imported
OrganismiCorallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides)Imported
Taxonomic identifieri1144275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeCorallococcus
ProteomesiUP000007587: Chromosome

Subcellular locationi

Cytoplasm By similarity SAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotations

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotations

Phylogenomic databases

KOiK01921.

Family and domain databases

Gene3Di3.30.1490.20. 2 hits.
3.30.470.20. 3 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 2 hits.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 2 hits.
PROSITEiPS50975. ATP_GRASP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8MSG9-1 [UniParc]FASTAAdd to Basket

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MRIALTYNLR LSDSEEEAEF DTQETVNTLA GAIERLGHRL ERFEVSGPAS    50
RTVARLEAYS PDLIFNTAEG RRGRFREAFY PALFDELGFA YTGSDAYALA 100
LTLDKQLTKL ILSKHGIRTP GWQYVEKLSE LQPENLRFPV IVKPNFEGSS 150
KGITQDSVAE TLEQVREKVA KALEKYPAGV LVEEYISGRD LTVPFLAAVD 200
NDYDGVLAPV EYVIDPEASQ GRKYAIYDYE LKTRREKSVS VRAPANIPAK 250
MSEDVRTMAQ KILQVLDCRD LGRLDFRVSD AGVPYFLEIN ALPSLEPGAG 300
IYAAAELEGL HLDGVINSII QSAGKRHKIR DNKSRQGRPA RKSGPLRVGF 350
SFNVKRVKPS ATAETVQEDS EAEYDSPNTL QAIREAIASW GHEVIDLEAT 400
AELPTVLSST PLDIVFNIAE GFKGRNRESQ VPAMLELLDI PYTGSDPATL 450
SLALDKALAK KIVRQAGILT PNFQLMVTGK ERLNKEFTTF PLIVKPVAEG 500
SSKGVVTKSV CYSEAELRDV VKEIAGKYQQ PALIEEYIGG REFTVGLLGE 550
RRPRVLPPME IVFLDKAEKN PVYSFQHKLD WTDRIRYDAP AKIEPALLEK 600
LRTAARNSFM ALGCRDVARI DFRMDDKGRI YFIECNPLPG LTPGWSDLVL 650
IAAGAGMDYR TLIGEIMAPA IRRYKEREAR RAQTENPAGT QAPPLNKVVQ 700
RIEEQNARAN ASAPAENTPA PRPELKS 727
Length:727
Mass (Da):80,757
Last modified:May 16, 2012 - v1
Checksum:i13AE7F8545CE4238
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003389 Genomic DNA. Translation: AFE08537.1.
RefSeqiWP_014396664.1. NC_017030.1.
YP_005369825.1. NC_017030.1.

Genome annotation databases

EnsemblBacteriaiAFE08537; AFE08537; COCOR_03852.
GeneIDi11984476.
KEGGiccx:COCOR_03852.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003389 Genomic DNA. Translation: AFE08537.1 .
RefSeqi WP_014396664.1. NC_017030.1.
YP_005369825.1. NC_017030.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFE08537 ; AFE08537 ; COCOR_03852 .
GeneIDi 11984476.
KEGGi ccx:COCOR_03852.

Phylogenomic databases

KOi K01921.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci CCOR1144275:GLBO-3856-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 2 hits.
3.30.470.20. 3 hits.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 2 hits.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 2 hits.
PROSITEi PS50975. ATP_GRASP. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259."
    Huntley S., Zhang Y., Treuner-Lange A., Sensen C.W., Sogaard-Andersen L.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25202 / DSM 2259 / NBRC 100086 / M2.

Entry informationi

Entry nameiH8MSG9_CORCM
AccessioniPrimary (citable) accession number: H8MSG9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: September 3, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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