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H8LYE2

- H8LYE2_SALTM

UniProt

H8LYE2 - H8LYE2_SALTM

Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. 798
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (16 May 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciSENT1008297:GLJT-3577-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Name:malSImported
    ORF Names:UMN798_3980Imported
    OrganismiSalmonella enterica subsp. enterica serovar Typhimurium str. 798Imported
    Taxonomic identifieri1008297 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
    ProteomesiUP000007588: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliH8LYE2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    H8LYE2-1 [UniParc]FASTAAdd to Basket

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    MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT    50
    LHIDQQCWQP SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT 100
    PTLLLSIKTE PERTAQLAYQ CPVWDGSPLT LDVRQTFPEG TVVRDYYSGQ 150
    TDTVQNGQIT LQPADSHGLL LLERAETHAP APFNWRNATV YFVLTDRFRN 200
    GDPTNDHSYS RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL GVNALWISSP 250
    FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH 300
    QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR 350
    PAAGQSWHSF NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL 400
    AFLPDIKTES TTPSGLPAFY ANKPDTKAKF IEGYTPRDYL THWLSQWVHD 450
    YGIDGFRVDT AKNVELPAWQ QLKTQASAAL REWKQANPDK ALDNSPFWMT 500
    GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMTDK 550
    MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP 600
    TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL 650
    TLKHGYGFVR QYGDDTVMVV WAGRR 675
    Length:675
    Mass (Da):75,742
    Last modified:May 16, 2012 - v1
    Checksum:i711E25C319D7EFB9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003386 Genomic DNA. Translation: AFD60521.1.
    RefSeqiYP_005398986.1. NC_017046.1.

    Genome annotation databases

    EnsemblBacteriaiAFD60521; AFD60521; UMN798_3980.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003386 Genomic DNA. Translation: AFD60521.1 .
    RefSeqi YP_005398986.1. NC_017046.1.

    3D structure databases

    ProteinModelPortali H8LYE2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFD60521 ; AFD60521 ; UMN798_3980 .

    Enzyme and pathway databases

    BioCyci SENT1008297:GLJT-3577-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Characterization and Differential Gene Expression between Two Phenotypic Phase Variants in Salmonella enterica Serovar Typhimurium."
      Patterson S.K., Borewicz K., Johnson T., Xu W., Isaacson R.E.
      PLoS ONE 7:E43592-E43592(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 798Imported.

    Entry informationi

    Entry nameiH8LYE2_SALTM
    AccessioniPrimary (citable) accession number: H8LYE2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 16, 2012
    Last sequence update: May 16, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3