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H8JX18

- H8JX18_VIBCL

UniProt

H8JX18 - H8JX18_VIBCL

Protein

Superoxide dismutase [Cu-Zn]

Gene

O3Y_07680

Organism
Vibrio cholerae IEC224
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (16 May 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciVCHO1134456:GLMN-1597-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    ORF Names:O3Y_07680Imported
    OrganismiVibrio cholerae IEC224Imported
    Taxonomic identifieri1134456 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000010113: Chromosome I

    Structurei

    3D structure databases

    ProteinModelPortaliH8JX18.
    SMRiH8JX18. Positions 20-169.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H8JX18-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNQFTLFAVV AFFSSSVLAQ EMTVVMTDLS SGQSVGTVTV TDSEYGTVFT    50
    PQLTGLPAGL HGFHVHANGS CETSSKDGKT VLGGAAGGHY DPQNTGKHGY 100
    PWTNDNHLGD LPALYVDAQG QANQPVLASR FKMAEVKGKA LMVHAGGDNH 150
    SDHPMPLGGG GARIVCGVIG L 171
    Length:171
    Mass (Da):17,697
    Last modified:May 16, 2012 - v1
    Checksum:i7483250CE4266C79
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003330 Genomic DNA. Translation: AFC58412.1.
    RefSeqiYP_005333400.1. NC_016944.1.

    Genome annotation databases

    EnsemblBacteriaiAFC58412; AFC58412; O3Y_07680.
    GeneIDi11914532.
    KEGGivci:O3Y_07680.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003330 Genomic DNA. Translation: AFC58412.1 .
    RefSeqi YP_005333400.1. NC_016944.1.

    3D structure databases

    ProteinModelPortali H8JX18.
    SMRi H8JX18. Positions 20-169.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFC58412 ; AFC58412 ; O3Y_07680 .
    GeneIDi 11914532.
    KEGGi vci:O3Y_07680.

    Phylogenomic databases

    KOi K04565.

    Enzyme and pathway databases

    BioCyci VCHO1134456:GLMN-1597-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of a Sucrose-Nonfermenting Epidemic Strain of Vibrio cholerae O1 from Brazil."
      Morais L.L., Garza D.R., Loureiro E.C., Nunes K.N., Vellasco R.S., da Silva C.P., Nunes M.R., Thompson C.C., Vicente A.C., Santos E.C.
      J. Bacteriol. 194:2772-2772(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IEC224Imported.
    2. "Genome-Wide Study of the Defective Sucrose Fermenter Strain of Vibrio cholerae from the Latin American Cholera Epidemic."
      Garza D.R., Thompson C.C., Loureiro E.C., Dutilh B.E., Inada D.T., Junior E.C., Cardoso J.F., Nunes M.R., de Lima C.P., Silvestre R.V., Nunes K.N., Santos E.C., Edwards R.A., Vicente A.C., de Sa Morais L.L.
      PLoS ONE 7:E37283-E37283(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IEC224Imported.

    Entry informationi

    Entry nameiH8JX18_VIBCL
    AccessioniPrimary (citable) accession number: H8JX18
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 16, 2012
    Last sequence update: May 16, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3