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H8JX18 (H8JX18_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
ORF Names:O3Y_07680 EMBL AFC58412.1
OrganismVibrio cholerae IEC224 [Complete proteome] EMBL AFC58412.1
Taxonomic identifier1134456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length171 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequences

Sequence LengthMass (Da)Tools
H8JX18 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 7483250CE4266C79

FASTA17117,697
        10         20         30         40         50         60 
MNQFTLFAVV AFFSSSVLAQ EMTVVMTDLS SGQSVGTVTV TDSEYGTVFT PQLTGLPAGL 

        70         80         90        100        110        120 
HGFHVHANGS CETSSKDGKT VLGGAAGGHY DPQNTGKHGY PWTNDNHLGD LPALYVDAQG 

       130        140        150        160        170 
QANQPVLASR FKMAEVKGKA LMVHAGGDNH SDHPMPLGGG GARIVCGVIG L 

« Hide

References

[1]"Complete Genome Sequence of a Sucrose-Nonfermenting Epidemic Strain of Vibrio cholerae O1 from Brazil."
Morais L.L., Garza D.R., Loureiro E.C., Nunes K.N., Vellasco R.S., da Silva C.P., Nunes M.R., Thompson C.C., Vicente A.C., Santos E.C.
J. Bacteriol. 194:2772-2772(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58412.1.
[2]"Genome-Wide Study of the Defective Sucrose Fermenter Strain of Vibrio cholerae from the Latin American Cholera Epidemic."
Garza D.R., Thompson C.C., Loureiro E.C., Dutilh B.E., Inada D.T., Junior E.C., Cardoso J.F., Nunes M.R., de Lima C.P., Silvestre R.V., Nunes K.N., Santos E.C., Edwards R.A., Vicente A.C., de Sa Morais L.L.
PLoS ONE 7:E37283-E37283(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58412.1.
[3]Garza D.R.Jr., Thompson C.C., Loureiro E.C.B., Dutilh B.E., Inada D.T., Junior E.C.S., Cardoso J.F., Nunes M.R.T., de Lima C.P.S., Vellasco R.S., Nunes K.N.B., Santos E.C.O., Edwards R.A., Vicente A.C.P., Morais L.L.C.S.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58412.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003330 Genomic DNA. Translation: AFC58412.1.
RefSeqYP_005333400.1. NC_016944.1.

3D structure databases

ProteinModelPortalH8JX18.
SMRH8JX18. Positions 20-169.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC58412; AFC58412; O3Y_07680.
GeneID11914532.
KEGGvci:O3Y_07680.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04565.

Enzyme and pathway databases

BioCycVCHO1134456:GLMN-1597-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8JX18_VIBCL
AccessionPrimary (citable) accession number: H8JX18
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)