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H8JSP4 (H8JSP4_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.2 EMBL AFC58784.1
Gene names
ORF Names:O3Y_09550 EMBL AFC58784.1
OrganismVibrio cholerae IEC224 [Complete proteome] EMBL AFC58784.1
Taxonomic identifier1134456 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H8JSP4 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: A4D8BD4720B2C532

FASTA40445,219
        10         20         30         40         50         60 
MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIR 

        70         80         90        100        110        120 
NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI GNGASELIVM AMQALLNNGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVALSG GKAVHYICDE EADWYPDLDD IRSKITPKTR GIVLINPNNP 

       190        200        210        220        230        240 
TGAVYSRDFL LEIIEIARKH KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK 

       250        260        270        280        290        300 
AYRVCGFRGG WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI 

       310        320        330        340        350        360 
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK MVLDFLVQEK 

       370        380        390        400 
VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT TYSQ 

« Hide

References

[1]"Complete Genome Sequence of a Sucrose-Nonfermenting Epidemic Strain of Vibrio cholerae O1 from Brazil."
Morais L.L., Garza D.R., Loureiro E.C., Nunes K.N., Vellasco R.S., da Silva C.P., Nunes M.R., Thompson C.C., Vicente A.C., Santos E.C.
J. Bacteriol. 194:2772-2772(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58784.1.
[2]"Genome-Wide Study of the Defective Sucrose Fermenter Strain of Vibrio cholerae from the Latin American Cholera Epidemic."
Garza D.R., Thompson C.C., Loureiro E.C., Dutilh B.E., Inada D.T., Junior E.C., Cardoso J.F., Nunes M.R., de Lima C.P., Silvestre R.V., Nunes K.N., Santos E.C., Edwards R.A., Vicente A.C., de Sa Morais L.L.
PLoS ONE 7:E37283-E37283(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58784.1.
[3]Garza D.R.Jr., Thompson C.C., Loureiro E.C.B., Dutilh B.E., Inada D.T., Junior E.C.S., Cardoso J.F., Nunes M.R.T., de Lima C.P.S., Vellasco R.S., Nunes K.N.B., Santos E.C.O., Edwards R.A., Vicente A.C.P., Morais L.L.C.S.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IEC224 EMBL AFC58784.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003330 Genomic DNA. Translation: AFC58784.1.
RefSeqYP_005333772.1. NC_016944.1.

3D structure databases

ProteinModelPortalH8JSP4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC58784; AFC58784; O3Y_09550.
GeneID11914908.
KEGGvci:O3Y_09550.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14260.

Enzyme and pathway databases

BioCycVCHO1134456:GLMN-1973-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8JSP4_VIBCL
AccessionPrimary (citable) accession number: H8JSP4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: January 22, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)