Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

H8JNY6 (H8JNY6_MYCIT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length593 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H8JNY6 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: F8B1D8084DF3C086

FASTA59367,879
        10         20         30         40         50         60 
MDLMNDAKEA VEHHPEGGSH VQDGVVEHPD AEDFNNAAAL PTDPTWFKHA VFYEVLVRAF 

        70         80         90        100        110        120 
FDANADGAGD LRGLLGQLDY LQWLGIDCIW LPPFYDSPLR DGGYDIRDFY KVLPEFGTVE 

       130        140        150        160        170        180 
DFVALLNAAH ERGIRVITDL VMNHTSDSHP WFQESRHDPD GPYGDYYVWS DTSERYTDAR 

       190        200        210        220        230        240 
IIFIDTEESN WTFDPVRKQF YWHRFFSHQP DLNYENPAVQ EAMIDVLRFW LGLGIDGFRL 

       250        260        270        280        290        300 
DAVPYLFERE GTNCENLPET HAFLKRVRKV VDDEFPGRVL LAEANQWPAD VVEYFGDPST 

       310        320        330        340        350        360 
GGDECHMAFH FPLMPRIFMA VRRESRFPIS EILAQTPEIP DMAQWGIFLR NHDELTLEMV 

       370        380        390        400        410        420 
TDEERDYMYS EYAKDPRMKA NVGIRRRLAP LLDNDRNQIE LFTALLLSLP GSPVLYYGDE 

       430        440        450        460        470        480 
IGMGDVIWLG DRDGVRTPMQ WTPDRNAGFS KANPGRLYLP PSQDSVYGYQ AVNVEAQRDT 

       490        500        510        520        530        540 
STSLLNFTRT MLAVRRRHEA FAIGSFEELG GSNPSVLAFL RQVSGDGDTV LCVNNLSRFP 

       550        560        570        580        590 
QPIELNLQHW SGRTPVELTG QVEFPRIGHL PYLLTLPGHG FYWFRLSGCE EDA 

« Hide

References

[1]"Complete Genome Sequence of Mycobacterium intracellulare Clinical Strain MOTT-64, Belonging to the INT1 Genotype."
Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Kook Y.H., Kim B.J.
J. Bacteriol. 194:3268-3268(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MOTT-64 EMBL AFC56626.1.
[2]Kim B.-J., Lee J.H., Lim J.-S., Choi I.-Y., Choi B.-S., Lim J.-S.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MOTT-64 EMBL AFC56626.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003324 Genomic DNA. Translation: AFC56626.1.
RefSeqYP_005350947.1. NC_016948.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC56626; AFC56626; OCQ_51150.
GeneID11901380.
KEGGmir:OCQ_51150.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8JNY6_MYCIT
AccessionPrimary (citable) accession number: H8JNY6
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)