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H8IQQ1 (H8IQQ1_MYCIA) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
H8IQQ1 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 88BCA362909D6B16

FASTA46050,848
        10         20         30         40         50         60 
MPQHPSLPAH SIAPAYTGRL FTAPVPALRM PDESMDPDAA YRFIHDELML DGSSRLNLAT 

        70         80         90        100        110        120 
FVTTWMDPEA GKLMAETFDK NMIDKDEYPA TAAIEQRCVC MVADLFHADG LNDADPYSAC 

       130        140        150        160        170        180 
GVSTIGSSEA VMLGGLAMKW RWRAKIGKDW KGRTPNLVMG SNVQVVWEKF CRYFDVEPRY 

       190        200        210        220        230        240 
LPMEEGRYVI TPEQVVDAVD ENTIGVVAIL GTTYTGELEP VADICGALDK LAAGGGVDVP 

       250        260        270        280        290        300 
VHVDAASGGF VVPFLHPELK WDFRLPRVVS INVSGHKYGL TYPGVGFVVW RSKEYLPDDL 

       310        320        330        340        350        360 
VFRVNYLGGD MPTFTLNFSR PGNQVVGQYY NFLRLGREGY TKVMQALSGT ARWLGEQLRV 

       370        380        390        400        410        420 
SEHCELVSDG SAIPVVAFRL SKDRGYTEFD VSHELRTYGW QVPAYTMPDN ATNVSVLRIV 

       430        440        450        460 
VREGLSADLA RALHDDAVSA LSSLDKLRPG GHYADQHFAH 

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References

[1]"Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003322 Genomic DNA. Translation: AFC45457.1.
RefSeqYP_005339778.1. NC_016946.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC45457; AFC45457; OCU_42380.
GeneID11910993.
KEGGmia:OCU_42380.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycMINT487521:GLGN-4281-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8IQQ1_MYCIA
AccessionPrimary (citable) accession number: H8IQQ1
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)