H8IN87 (H8IN87_MYCIA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL AFC45270.1

Gene names

Ordered Locus Names:

OCU_40510 EMBL AFC45270.1

Organism

Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) [Complete proteome] [HAMAP] EMBL AFC45270.1

Taxonomic identifier

487521 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC) › Mycobacterium intracellulare

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707
Ligand	DNA-binding RuleBase RU000707 SAAS SAAS016032
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H8IN87 [UniParc]. Last modified May 16, 2012. Version 1. Checksum: 327E637BE14D18AF	FASTA	519	55,593
	10 20 30 40 50 60 MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD ERDCAYYTTL 70 80 90 100 110 120 IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF LASNVGRGQP LAHRMAVLAT 130 140 150 160 170 180 LFANARGHIS RLIHSHCASA ALLADRIGLS PDVQAALAFA FERYDGGGLP AGARGETIPI 190 200 210 220 230 240 QMRIAQLADM VEVHHRTYGV APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA 250 260 270 280 290 300 WAAALGEAPD RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT 310 320 330 340 350 360 DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL NQVPGLGRLA 370 380 390 400 410 420 EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA REPRPYREPM SAGAAARRLR 430 440 450 460 470 480 GRAQAGELDA VAVEAVLHAA GQPAQRPNLR PDRLTPREVE VLCLVARGAS NKEIAASLVI 490 500 510 SEKTARNHVE RTYAKIGVSN RIGASMYALR HGLVNPVPS

References

[1]

"Complete Genome Sequence of Mycobacterium intracellulare Strain ATCC 13950T." Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J. J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003322 Genomic DNA. Translation: AFC45270.1.
RefSeq	YP_005339591.1. NC_016946.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFC45270; AFC45270; OCU_40510.
GeneID	11910806.
KEGG	mia:OCU_40510.
Organism-specific databases
CMR	Search...
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 1.10.3210.10. 1 hit.
InterPro	IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H8IN87_MYCIA

Accession

Primary (citable) accession number: H8IN87

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2012
Last sequence update:	May 16, 2012
Last modified:	May 1, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)