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H8IN87

- H8IN87_MYCIA

UniProt

H8IN87 - H8IN87_MYCIA

Protein
Submitted name:

Uncharacterized protein

Gene

OCU_40510

Organism
Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (16 May 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. metal ion binding Source: InterPro
    3. phosphoric diester hydrolase activity Source: InterPro
    4. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciMINT487521:GLGN-4094-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:OCU_40510Imported
    OrganismiMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)Imported
    Taxonomic identifieri487521 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
    ProteomesiUP000008004: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliH8IN87.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProiIPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00196. GerE. 1 hit.
    [Graphical view]
    PRINTSiPR00038. HTHLUXR.
    SMARTiSM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    PROSITEiPS50043. HTH_LUXR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H8IN87-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD    50
    ERDCAYYTTL IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF 100
    LASNVGRGQP LAHRMAVLAT LFANARGHIS RLIHSHCASA ALLADRIGLS 150
    PDVQAALAFA FERYDGGGLP AGARGETIPI QMRIAQLADM VEVHHRTYGV 200
    APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA WAAALGEAPD 250
    RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT 300
    DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL 350
    NQVPGLGRLA EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA 400
    REPRPYREPM SAGAAARRLR GRAQAGELDA VAVEAVLHAA GQPAQRPNLR 450
    PDRLTPREVE VLCLVARGAS NKEIAASLVI SEKTARNHVE RTYAKIGVSN 500
    RIGASMYALR HGLVNPVPS 519
    Length:519
    Mass (Da):55,593
    Last modified:May 16, 2012 - v1
    Checksum:i327E637BE14D18AF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003322 Genomic DNA. Translation: AFC45270.1.
    RefSeqiWP_014380953.1. NC_016946.1.
    YP_005339591.1. NC_016946.1.

    Genome annotation databases

    EnsemblBacteriaiAFC45270; AFC45270; OCU_40510.
    GeneIDi11910806.
    KEGGimia:OCU_40510.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003322 Genomic DNA. Translation: AFC45270.1 .
    RefSeqi WP_014380953.1. NC_016946.1.
    YP_005339591.1. NC_016946.1.

    3D structure databases

    ProteinModelPortali H8IN87.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFC45270 ; AFC45270 ; OCU_40510 .
    GeneIDi 11910806.
    KEGGi mia:OCU_40510.

    Enzyme and pathway databases

    BioCyci MINT487521:GLGN-4094-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProi IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00196. GerE. 1 hit.
    [Graphical view ]
    PRINTSi PR00038. HTHLUXR.
    SMARTi SM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    PROSITEi PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
      Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
      J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600Imported.

    Entry informationi

    Entry nameiH8IN87_MYCIA
    AccessioniPrimary (citable) accession number: H8IN87
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 16, 2012
    Last sequence update: May 16, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3