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H8IN87

- H8IN87_MYCIA

UniProt

H8IN87 - H8IN87_MYCIA

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Protein
Submitted name: Uncharacterized protein
Gene
OCU_40510
Organism
Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: InterPro
  3. phosphoric diester hydrolase activity Source: InterPro
  4. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciMINT487521:GLGN-4094-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:OCU_40510Imported
OrganismiMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)Imported
Taxonomic identifieri487521 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000008004: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH8IN87.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8IN87-1 [UniParc]FASTAAdd to Basket

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MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD    50
ERDCAYYTTL IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF 100
LASNVGRGQP LAHRMAVLAT LFANARGHIS RLIHSHCASA ALLADRIGLS 150
PDVQAALAFA FERYDGGGLP AGARGETIPI QMRIAQLADM VEVHHRTYGV 200
APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA WAAALGEAPD 250
RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT 300
DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL 350
NQVPGLGRLA EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA 400
REPRPYREPM SAGAAARRLR GRAQAGELDA VAVEAVLHAA GQPAQRPNLR 450
PDRLTPREVE VLCLVARGAS NKEIAASLVI SEKTARNHVE RTYAKIGVSN 500
RIGASMYALR HGLVNPVPS 519
Length:519
Mass (Da):55,593
Last modified:May 16, 2012 - v1
Checksum:i327E637BE14D18AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003322 Genomic DNA. Translation: AFC45270.1.
RefSeqiWP_014380953.1. NC_016946.1.
YP_005339591.1. NC_016946.1.

Genome annotation databases

EnsemblBacteriaiAFC45270; AFC45270; OCU_40510.
GeneIDi11910806.
KEGGimia:OCU_40510.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003322 Genomic DNA. Translation: AFC45270.1 .
RefSeqi WP_014380953.1. NC_016946.1.
YP_005339591.1. NC_016946.1.

3D structure databases

ProteinModelPortali H8IN87.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFC45270 ; AFC45270 ; OCU_40510 .
GeneIDi 11910806.
KEGGi mia:OCU_40510.

Enzyme and pathway databases

BioCyci MINT487521:GLGN-4094-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00196. GerE. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
PROSITEi PS50043. HTH_LUXR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
    Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
    J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600.

Entry informationi

Entry nameiH8IN87_MYCIA
AccessioniPrimary (citable) accession number: H8IN87
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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