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H8IN87 (H8IN87_MYCIA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
H8IN87 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 327E637BE14D18AF

FASTA51955,593
        10         20         30         40         50         60 
MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD ERDCAYYTTL 

        70         80         90        100        110        120 
IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF LASNVGRGQP LAHRMAVLAT 

       130        140        150        160        170        180 
LFANARGHIS RLIHSHCASA ALLADRIGLS PDVQAALAFA FERYDGGGLP AGARGETIPI 

       190        200        210        220        230        240 
QMRIAQLADM VEVHHRTYGV APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA 

       250        260        270        280        290        300 
WAAALGEAPD RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT 

       310        320        330        340        350        360 
DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL NQVPGLGRLA 

       370        380        390        400        410        420 
EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA REPRPYREPM SAGAAARRLR 

       430        440        450        460        470        480 
GRAQAGELDA VAVEAVLHAA GQPAQRPNLR PDRLTPREVE VLCLVARGAS NKEIAASLVI 

       490        500        510 
SEKTARNHVE RTYAKIGVSN RIGASMYALR HGLVNPVPS 

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References

[1]"Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003322 Genomic DNA. Translation: AFC45270.1.
RefSeqYP_005339591.1. NC_016946.1.

3D structure databases

ProteinModelPortalH8IN87.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC45270; AFC45270; OCU_40510.
GeneID11910806.
KEGGmia:OCU_40510.

Organism-specific databases

CMRSearch...

Enzyme and pathway databases

BioCycMINT487521:GLGN-4094-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8IN87_MYCIA
AccessionPrimary (citable) accession number: H8IN87
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: February 19, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)