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Protein
Submitted name:

Uncharacterized protein

Gene

OCU_40510

Organism
Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi471 – 490H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:OCU_40510Imported
OrganismiMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)Imported
Taxonomic identifieri487521 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
Proteomesi
  • UP000008004 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH8IN87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini447 – 512HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

OMAiTRCQRGA.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd00077. HDc. 1 hit.
cd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H8IN87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD
60 70 80 90 100
ERDCAYYTTL IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF
110 120 130 140 150
LASNVGRGQP LAHRMAVLAT LFANARGHIS RLIHSHCASA ALLADRIGLS
160 170 180 190 200
PDVQAALAFA FERYDGGGLP AGARGETIPI QMRIAQLADM VEVHHRTYGV
210 220 230 240 250
APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA WAAALGEAPD
260 270 280 290 300
RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT
310 320 330 340 350
DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL
360 370 380 390 400
NQVPGLGRLA EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA
410 420 430 440 450
REPRPYREPM SAGAAARRLR GRAQAGELDA VAVEAVLHAA GQPAQRPNLR
460 470 480 490 500
PDRLTPREVE VLCLVARGAS NKEIAASLVI SEKTARNHVE RTYAKIGVSN
510
RIGASMYALR HGLVNPVPS
Length:519
Mass (Da):55,593
Last modified:May 16, 2012 - v1
Checksum:i327E637BE14D18AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003322 Genomic DNA. Translation: AFC45270.1.
RefSeqiWP_014380953.1. NC_016946.1.

Genome annotation databases

EnsemblBacteriaiAFC45270; AFC45270; OCU_40510.
GeneIDi11910806.
KEGGimia:OCU_40510.
PATRICifig|487521.10.peg.4058.

Similar proteinsi

Entry informationi

Entry nameiH8IN87_MYCIA
AccessioniPrimary (citable) accession number: H8IN87
Entry historyiIntegrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: September 27, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported