Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

H8IN87

- H8IN87_MYCIA

UniProt

H8IN87 - H8IN87_MYCIA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Uncharacterized protein

Gene

OCU_40510

Organism
Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMINT487521:GLGN-4094-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:OCU_40510Imported
OrganismiMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)Imported
Taxonomic identifieri487521 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000008004: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH8IN87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8IN87-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPESELPTRA ELLAALSVAI DLGLGQPAEH MLRAALIATR LADRLGLCAD
60 70 80 90 100
ERDCAYYTTL IMWVGCHADS HEYARWFGDD IAVRHDSYLV DWSGIPYLRF
110 120 130 140 150
LASNVGRGQP LAHRMAVLAT LFANARGHIS RLIHSHCASA ALLADRIGLS
160 170 180 190 200
PDVQAALAFA FERYDGGGLP AGARGETIPI QMRIAQLADM VEVHHRTYGV
210 220 230 240 250
APGAVAMVSS RRGGQFDPRV ADAFLRDADA ILAGPPAGDA WAAALGEAPD
260 270 280 290 300
RHQRLDDASL DALLVALGDF VDLKCPFTLG HSRAVARLAG DAALAAGMDT
310 320 330 340 350
DAVALTRRAG HVHDLGRIGV SNHIWSRQGP LSASEFERVR LHPYLTVRVL
360 370 380 390 400
NQVPGLGRLA EVAGNHHECL DGSGYPRGLA GPALHMPDRI LAVAVCYQSA
410 420 430 440 450
REPRPYREPM SAGAAARRLR GRAQAGELDA VAVEAVLHAA GQPAQRPNLR
460 470 480 490 500
PDRLTPREVE VLCLVARGAS NKEIAASLVI SEKTARNHVE RTYAKIGVSN
510
RIGASMYALR HGLVNPVPS
Length:519
Mass (Da):55,593
Last modified:May 16, 2012 - v1
Checksum:i327E637BE14D18AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003322 Genomic DNA. Translation: AFC45270.1.
RefSeqiWP_014380953.1. NC_016946.1.
YP_005339591.1. NC_016946.1.

Genome annotation databases

EnsemblBacteriaiAFC45270; AFC45270; OCU_40510.
GeneIDi11910806.
KEGGimia:OCU_40510.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003322 Genomic DNA. Translation: AFC45270.1 .
RefSeqi WP_014380953.1. NC_016946.1.
YP_005339591.1. NC_016946.1.

3D structure databases

ProteinModelPortali H8IN87.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFC45270 ; AFC45270 ; OCU_40510 .
GeneIDi 11910806.
KEGGi mia:OCU_40510.

Enzyme and pathway databases

BioCyci MINT487521:GLGN-4094-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00196. GerE. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
PROSITEi PS50043. HTH_LUXR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
    Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
    J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600Imported.

Entry informationi

Entry nameiH8IN87_MYCIA
AccessioniPrimary (citable) accession number: H8IN87
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3