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H8ILS4 (H8ILS4_MYCIA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length351 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFC41546.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H8ILS4 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 829880542E963FF3

FASTA35139,398
        10         20         30         40         50         60 
MPPVSPMLAK SVRAIPPHAS YEPKWDGFRS ICFRDGDDVE LGSRNERPMT RYFPELVAAV 

        70         80         90        100        110        120 
RAELPERCVI DGEIVIATDH GLDFEALQQR IHPADSRVRM LAEATPASFI AFDLLALAGD 

       130        140        150        160        170        180 
DYTRRPFSER RAALVDAVGG SGRSIHVTPA TTDLGTAQRW FDEFEGAGLD GVIAKPLDVT 

       190        200        210        220        230        240 
YQPDKRVMFK IKHERTADCV VAGYRVHKSG ADAIGSLLLG LYQDDGQLAS VGVIGAFPMT 

       250        260        270        280        290        300 
ERRRLFAELQ PLVTDFADHP WNWAAHEAGE RTPRKNEYSR WNAGKDLSFV PLRPERVVEV 

       310        320        330        340        350 
RYDHMEGRRF RHTAQFNRWR PDRDPRSCTY EQLEQPVTFS LGEIVPGLGP G 

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References

[1]"Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003322 Genomic DNA. Translation: AFC41546.1.
RefSeqYP_005335867.1. NC_016946.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC41546; AFC41546; OCU_03260.
GeneID11907040.
KEGGmia:OCU_03260.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMINT487521:GLGN-333-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8ILS4_MYCIA
AccessionPrimary (citable) accession number: H8ILS4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)