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H8ILS4

- H8ILS4_MYCIA

UniProt

H8ILS4 - H8ILS4_MYCIA

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

OCU_03260

Organism
Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMINT487521:GLGN-333-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:OCU_03260Imported
OrganismiMycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600)Imported
Taxonomic identifieri487521 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)
ProteomesiUP000008004: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H8ILS4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPPVSPMLAK SVRAIPPHAS YEPKWDGFRS ICFRDGDDVE LGSRNERPMT
60 70 80 90 100
RYFPELVAAV RAELPERCVI DGEIVIATDH GLDFEALQQR IHPADSRVRM
110 120 130 140 150
LAEATPASFI AFDLLALAGD DYTRRPFSER RAALVDAVGG SGRSIHVTPA
160 170 180 190 200
TTDLGTAQRW FDEFEGAGLD GVIAKPLDVT YQPDKRVMFK IKHERTADCV
210 220 230 240 250
VAGYRVHKSG ADAIGSLLLG LYQDDGQLAS VGVIGAFPMT ERRRLFAELQ
260 270 280 290 300
PLVTDFADHP WNWAAHEAGE RTPRKNEYSR WNAGKDLSFV PLRPERVVEV
310 320 330 340 350
RYDHMEGRRF RHTAQFNRWR PDRDPRSCTY EQLEQPVTFS LGEIVPGLGP

G
Length:351
Mass (Da):39,398
Last modified:May 16, 2012 - v1
Checksum:i829880542E963FF3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003322 Genomic DNA. Translation: AFC41546.1.
RefSeqiYP_005335867.1. NC_016946.1.

Genome annotation databases

EnsemblBacteriaiAFC41546; AFC41546; OCU_03260.
GeneIDi11907040.
KEGGimia:OCU_03260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003322 Genomic DNA. Translation: AFC41546.1 .
RefSeqi YP_005335867.1. NC_016946.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFC41546 ; AFC41546 ; OCU_03260 .
GeneIDi 11907040.
KEGGi mia:OCU_03260.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MINT487521:GLGN-333-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Mycobacterium intracellulare strain ATCC 13950T."
    Kim B.J., Choi B.S., Lim J.S., Choi I.Y., Lee J.H., Chun J., Kook Y.H., Kim B.J.
    J. Bacteriol. 194:2750-2750(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600Imported.

Entry informationi

Entry nameiH8ILS4_MYCIA
AccessioniPrimary (citable) accession number: H8ILS4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 1, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3