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H8ICA4 (H8ICA4_PASMH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufA EMBL AFF25251.1
Synonyms:tuf HAMAP-Rule MF_00118, tufA2 EMBL AFF24835.1
Ordered Locus Names:PMCN06_1607 EMBL AFF24835.1, PMCN06_2025 EMBL AFF25251.1
OrganismPasteurella multocida (strain HN06) [Complete proteome] [HAMAP] EMBL AFF25251.1
Taxonomic identifier1132496 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaePasteurella

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H8ICA4 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 0C704405CF5E9A4C

FASTA39443,353
        10         20         30         40         50         60 
MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLAKHY GGAARAFDQI DNAPEEKARG 

        70         80         90        100        110        120 
ITINTSHVEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLGRQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLSQ YDFPGDDTPI VRGSALQALN 

       190        200        210        220        230        240 
GVAEWEEKIL ELANHLDTYI PEPQRAIDQP FLLPIEDVFS ISGRGTVVTG RVERGIIRTG 

       250        260        270        280        290        300 
EEVEIVGIKA TTKTTVTGVE MFRKLLDEGR AGENVGALLR GTKREEIERG QVLAKPGSIT 

       310        320        330        340        350        360 
PHTDFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMT 

       370        380        390 
VSLIHPIAMD QGLRFAIREG GRTVGAGVVA KIIK 

« Hide

References

« Hide 'large scale' references
[1]"Complete Genome Sequence of Pasteurella multocida HN06, a Toxigenic Strain of Serogroup D."
Liu W., Yang M., Xu Z., Zheng H., Liang W., Zhou R., Wu B., Chen H.
J. Bacteriol. 194:3292-3293(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HN06 EMBL AFF25251.1.
[2]"Complete genome sequence of Pasteurella multocida HN06, a toxigenic strain of serogroup D."
Liu W., Xu Z., Liang W., Wu B.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HN06.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003313 Genomic DNA. Translation: AFF24835.1.
CP003313 Genomic DNA. Translation: AFF25251.1.
RefSeqYP_005364006.1. NC_017027.1.
YP_005364422.1. NC_017027.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFF24835; AFF24835; PMCN06_1607.
AFF25251; AFF25251; PMCN06_2025.
GeneID11961146.
11963071.
KEGGpmv:PMCN06_1607.
pmv:PMCN06_2025.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycPMUL1132496:GLIB-1644-MONOMER.
PMUL1132496:GLIB-2072-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH8ICA4_PASMH
AccessionPrimary (citable) accession number: H8ICA4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)