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H8I7E1 (H8I7E1_METCZ) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase D, 3'-phosphoesterase domain protein EMBL AFD00807.1
EC=6.5.1.1 EMBL AFD00807.1
Gene names
Ordered Locus Names:Mtc_2068 EMBL AFD00807.1
OrganismMethanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) [Complete proteome] [HAMAP] EMBL AFD00807.1
Taxonomic identifier1041930 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanomicrobia › Methanocellales › Methanocellaceae › Methanocella ›

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFD00807.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA ligase (ATP) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H8I7E1 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: D976ED835115855C

FASTA16518,498
        10         20         30         40         50         60 
MPEHPIYVIQ KHAASHLHYD FRLEVCGVLK SWAIPKGPST DPRVKRLAMP TEDHPLEYAT 

        70         80         90        100        110        120 
FEGVIPEGQY GAGTVMVWDI GTYRNLRGDE ADMEQAYGEG RIEVWLEGRK LKGGYALIRA 

       130        140        150        160 
GRMGDKRGWL LIKMRDEYAN KPEDPAVTEP DSALTGRTLE EISGG

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References

[1]"Complete Genome Sequence of a Thermophilic Methanogen, Methanocella conradii HZ254, Isolated from Chinese Rice Field Soil."
Lu Z., Lu Y.
J. Bacteriol. 194:2398-2399(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003243 Genomic DNA. Translation: AFD00807.1.
RefSeqYP_005381325.1. NC_017034.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFD00807; AFD00807; Mtc_2068.
GeneID11972223.
KEGGmez:Mtc_2068.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAMPTEDHP.

Enzyme and pathway databases

BioCycMCON1041930:GLGC-2123-MONOMER.

Family and domain databases

InterProIPR014144. LigD_PE_domain.
[Graphical view]
PfamPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8I7E1_METCZ
AccessionPrimary (citable) accession number: H8I7E1
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: May 29, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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