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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Mtc_2068

Organism
Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMCON1041930:GLGC-2123-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Mtc_2068Imported
OrganismiMethanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254)Imported
Taxonomic identifieri1041930 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000005233 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

OMAiIETEDHP.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

H8I7E1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPEHPIYVIQ KHAASHLHYD FRLEVCGVLK SWAIPKGPST DPRVKRLAMP
60 70 80 90 100
TEDHPLEYAT FEGVIPEGQY GAGTVMVWDI GTYRNLRGDE ADMEQAYGEG
110 120 130 140 150
RIEVWLEGRK LKGGYALIRA GRMGDKRGWL LIKMRDEYAN KPEDPAVTEP
160
DSALTGRTLE EISGG
Length:165
Mass (Da):18,498
Last modified:May 16, 2012 - v1
Checksum:iD976ED835115855C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003243 Genomic DNA. Translation: AFD00807.1.
RefSeqiYP_005381325.1. NC_017034.1.

Genome annotation databases

EnsemblBacteriaiAFD00807; AFD00807; Mtc_2068.
GeneIDi11972223.
KEGGimez:Mtc_2068.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003243 Genomic DNA. Translation: AFD00807.1.
RefSeqiYP_005381325.1. NC_017034.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFD00807; AFD00807; Mtc_2068.
GeneIDi11972223.
KEGGimez:Mtc_2068.

Phylogenomic databases

OMAiIETEDHP.

Enzyme and pathway databases

BioCyciMCON1041930:GLGC-2123-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of a thermophilic methanogen, Methanocella conradii HZ254, isolated from Chinese rice field soil."
    Lu Z., Lu Y.
    J. Bacteriol. 194:2398-2399(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254Imported.

Entry informationi

Entry nameiH8I7E1_METCZ
AccessioniPrimary (citable) accession number: H8I7E1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: March 4, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.