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H8H0U3

- H8H0U3_DEIGI

UniProt

H8H0U3 - H8H0U3_DEIGI

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Protein
Submitted name:

Superoxide dismutase

Gene

sodC

Organism
Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciDGOB745776:GLCE-3135-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodCImported
Ordered Locus Names:DGo_PA0076Imported
Encoded oniPlasmid P1Imported
OrganismiDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)Imported
Taxonomic identifieri745776 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000007575: Plasmid P1

Family & Domainsi

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.130.10.10. 1 hit.
2.60.40.200. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR013658. SGL.
IPR001424. SOD_Cu_Zn_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF08450. SGL. 1 hit.
PF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

H8H0U3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MGRLKMLLGG ALLLGTASAG GAGLPMTAPM PAPTNAAAPA GTALAATATL
60 70 80 90 100
RDPQGTAQGT VTLRQMGMGV QVRVEARGLK PGQHGMHVHE FGRCTPGVDA
110 120 130 140 150
ATNTVVAFGG AGGHFDPGRT GNHDAPTAPN TAGHGGDLPM LNVGADGVGR
160 170 180 190 200
ATFMTDKLSL TGMDGVLNRS LVIHAQPDDY KSDPSGLTGA RERCGVLTRT
210 220 230 240 250
NYAARDYALP GAQDFPEGVA YDARKGVIYA GSAQSGTIYA VNAATGAVSK
260 270 280 290 300
FSEGGAVGRA SALGLKVDTQ GRLWIAGGAQ GTVSVLSPDG APVAVLETPR
310 320 330 340 350
SPNAYLNDLA PAPDGSVYVT DSTRPAIYRV TPDLRISEWL SLAGTPIRYG
360 370 380 390 400
PGLNLNGVVA TPDGRYLLAV KLNTGDLWRI DLRSKAIRRV MGGLNNGDGL
410 420 430 440 450
LLDGRTLYVS RNKDGIISKV TLGADYASGQ VTAEEPVTGL RFPTTLAAIG
460 470 480
GDLIVSQGQL DKLQGGTPET PFRLTRFPKF
Length:480
Mass (Da):49,377
Last modified:May 16, 2012 - v1
Checksum:i2E55EE74FA7F3A5C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002192 Genomic DNA. Translation: AFD26962.1.
RefSeqiWP_014695480.1. NC_017805.1.
YP_006271497.1. NC_017805.1.

Genome annotation databases

EnsemblBacteriaiAFD26962; AFD26962; DGo_PA0076.
GeneIDi12826745.
KEGGidgo:DGo_PA0076.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002192 Genomic DNA. Translation: AFD26962.1 .
RefSeqi WP_014695480.1. NC_017805.1.
YP_006271497.1. NC_017805.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFD26962 ; AFD26962 ; DGo_PA0076 .
GeneIDi 12826745.
KEGGi dgo:DGo_PA0076.

Phylogenomic databases

KOi K04565.

Enzyme and pathway databases

BioCyci DGOB745776:GLCE-3135-MONOMER.

Family and domain databases

Gene3Di 2.120.10.30. 1 hit.
2.130.10.10. 1 hit.
2.60.40.200. 1 hit.
InterProi IPR011042. 6-blade_b-propeller_TolB-like.
IPR013658. SGL.
IPR001424. SOD_Cu_Zn_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view ]
Pfami PF08450. SGL. 1 hit.
PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence and transcriptome analysis of the radioresistant bacterium Deinococcus gobiensis: insights into the extreme environmental adaptations."
    Yuan M., Chen M., Zhang W., Lu W., Wang J., Yang M., Zhao P., Tang R., Li X., Hao Y., Zhou Z., Zhan Y., Yu H., Teng C., Yan Y., Ping S., Wang Y., Lin M.
    PLoS ONE 7:E34458-E34458(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0Imported and Plasmid P1Imported.

Entry informationi

Entry nameiH8H0U3_DEIGI
AccessioniPrimary (citable) accession number: H8H0U3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: October 1, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3