H8H0U3 (H8H0U3_DEIGI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Superoxide dismutase EMBL AFD26962.1

Gene names

Name:	sodC EMBL AFD26962.1
Ordered Locus Names:	DGo_PA0076 EMBL AFD26962.1

Encoded on

Plasmid P1 EMBL AFD26962.1

Organism

Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) [Complete proteome] [HAMAP] EMBL AFD26962.1

Taxonomic identifier

745776 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › Deinococcus gobiensis

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL AFD26962.1
Gene Ontology (GO)
Biological_process	oxidation-reduction process Inferred from electronic annotation. Source: InterPro superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H8H0U3 [UniParc]. Last modified May 16, 2012. Version 1. Checksum: 2E55EE74FA7F3A5C	FASTA	480	49,377
	10 20 30 40 50 60 MGRLKMLLGG ALLLGTASAG GAGLPMTAPM PAPTNAAAPA GTALAATATL RDPQGTAQGT 70 80 90 100 110 120 VTLRQMGMGV QVRVEARGLK PGQHGMHVHE FGRCTPGVDA ATNTVVAFGG AGGHFDPGRT 130 140 150 160 170 180 GNHDAPTAPN TAGHGGDLPM LNVGADGVGR ATFMTDKLSL TGMDGVLNRS LVIHAQPDDY 190 200 210 220 230 240 KSDPSGLTGA RERCGVLTRT NYAARDYALP GAQDFPEGVA YDARKGVIYA GSAQSGTIYA 250 260 270 280 290 300 VNAATGAVSK FSEGGAVGRA SALGLKVDTQ GRLWIAGGAQ GTVSVLSPDG APVAVLETPR 310 320 330 340 350 360 SPNAYLNDLA PAPDGSVYVT DSTRPAIYRV TPDLRISEWL SLAGTPIRYG PGLNLNGVVA 370 380 390 400 410 420 TPDGRYLLAV KLNTGDLWRI DLRSKAIRRV MGGLNNGDGL LLDGRTLYVS RNKDGIISKV 430 440 450 460 470 480 TLGADYASGQ VTAEEPVTGL RFPTTLAAIG GDLIVSQGQL DKLQGGTPET PFRLTRFPKF

References

[1]

"Genome sequence and transcriptome analysis of the radioresistant bacterium Deinococcus gobiensis: insights into the extreme environmental adaptations." Yuan M., Chen M., Zhang W., Lu W., Wang J., Yang M., Zhao P., Tang R., Li X., Hao Y., Zhou Z., Zhan Y., Yu H., Teng C., Yan Y., Ping S., Wang Y., Lin M. PLoS ONE 7:E34458-E34458(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002192 Genomic DNA. Translation: AFD26962.1.
RefSeq	YP_006271497.1. NC_017805.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFD26962; AFD26962; DGo_PA0076.
GeneID	12826745.
KEGG	dgo:DGo_PA0076.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04565.
Family and domain databases
Gene3D	2.120.10.30. 1 hit. 2.130.10.10. 1 hit. 2.60.40.200. 1 hit.
InterPro	IPR011042. 6-blade_b-propeller_TolB-like. IPR013658. SGL. IPR024134. SOD_Cu/Zn_/chaperones. IPR001424. SOD_Cu_Zn_dom. IPR015943. WD40/YVTN_repeat-like_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF08450. SGL. 1 hit. PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
ProtoNet	Search...

Entry information

Entry name

H8H0U3_DEIGI

Accession

Primary (citable) accession number: H8H0U3

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2012
Last sequence update:	May 16, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)