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H8H0U3 (H8H0U3_DEIGI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:sodC EMBL AFD26962.1
Ordered Locus Names:DGo_PA0076 EMBL AFD26962.1
Encoded onPlasmid P1 Ref.1 EMBL AFD26962.1
OrganismDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) [Complete proteome] [HAMAP] EMBL AFD26962.1
Taxonomic identifier745776 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H8H0U3 [UniParc].

Last modified May 16, 2012. Version 1.
Checksum: 2E55EE74FA7F3A5C

FASTA48049,377
        10         20         30         40         50         60 
MGRLKMLLGG ALLLGTASAG GAGLPMTAPM PAPTNAAAPA GTALAATATL RDPQGTAQGT 

        70         80         90        100        110        120 
VTLRQMGMGV QVRVEARGLK PGQHGMHVHE FGRCTPGVDA ATNTVVAFGG AGGHFDPGRT 

       130        140        150        160        170        180 
GNHDAPTAPN TAGHGGDLPM LNVGADGVGR ATFMTDKLSL TGMDGVLNRS LVIHAQPDDY 

       190        200        210        220        230        240 
KSDPSGLTGA RERCGVLTRT NYAARDYALP GAQDFPEGVA YDARKGVIYA GSAQSGTIYA 

       250        260        270        280        290        300 
VNAATGAVSK FSEGGAVGRA SALGLKVDTQ GRLWIAGGAQ GTVSVLSPDG APVAVLETPR 

       310        320        330        340        350        360 
SPNAYLNDLA PAPDGSVYVT DSTRPAIYRV TPDLRISEWL SLAGTPIRYG PGLNLNGVVA 

       370        380        390        400        410        420 
TPDGRYLLAV KLNTGDLWRI DLRSKAIRRV MGGLNNGDGL LLDGRTLYVS RNKDGIISKV 

       430        440        450        460        470        480 
TLGADYASGQ VTAEEPVTGL RFPTTLAAIG GDLIVSQGQL DKLQGGTPET PFRLTRFPKF 

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References

[1]"Genome Sequence and Transcriptome Analysis of the Radioresistant Bacterium Deinococcus gobiensis: Insights into the Extreme Environmental Adaptations."
Yuan M., Chen M., Zhang W., Lu W., Wang J., Yang M., Zhao P., Tang R., Li X., Hao Y., Zhou Z., Zhan Y., Yu H., Teng C., Yan Y., Ping S., Wang Y., Lin M.
PLoS ONE 7:E34458-E34458(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002192 Genomic DNA. Translation: AFD26962.1.
RefSeqYP_006271497.1. NC_017805.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFD26962; AFD26962; DGo_PA0076.
GeneID12826745.
KEGGdgo:DGo_PA0076.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04565.

Enzyme and pathway databases

BioCycDGOB745776:GLCE-3135-MONOMER.

Family and domain databases

Gene3D2.120.10.30. 1 hit.
2.130.10.10. 1 hit.
2.60.40.200. 1 hit.
InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR013658. SGL.
IPR001424. SOD_Cu_Zn_dom.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamPF08450. SGL. 1 hit.
PF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH8H0U3_DEIGI
AccessionPrimary (citable) accession number: H8H0U3
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: June 11, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)