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H8H0U3

- H8H0U3_DEIGI

UniProt

H8H0U3 - H8H0U3_DEIGI

Protein
Submitted name:

Superoxide dismutase

Gene

sodC

Organism
Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (16 May 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro

    GO - Biological processi

    1. oxidation-reduction process Source: InterPro
    2. superoxide metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciDGOB745776:GLCE-3135-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Superoxide dismutaseImported
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:DGo_PA0076Imported
    Encoded oniPlasmid P1Imported
    OrganismiDeinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0)Imported
    Taxonomic identifieri745776 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
    ProteomesiUP000007575: Plasmid P1

    Family & Domainsi

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.120.10.30. 1 hit.
    2.130.10.10. 1 hit.
    2.60.40.200. 1 hit.
    InterProiIPR011042. 6-blade_b-propeller_TolB-like.
    IPR013658. SGL.
    IPR001424. SOD_Cu_Zn_dom.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view]
    PfamiPF08450. SGL. 1 hit.
    PF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H8H0U3-1 [UniParc]FASTAAdd to Basket

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    MGRLKMLLGG ALLLGTASAG GAGLPMTAPM PAPTNAAAPA GTALAATATL    50
    RDPQGTAQGT VTLRQMGMGV QVRVEARGLK PGQHGMHVHE FGRCTPGVDA 100
    ATNTVVAFGG AGGHFDPGRT GNHDAPTAPN TAGHGGDLPM LNVGADGVGR 150
    ATFMTDKLSL TGMDGVLNRS LVIHAQPDDY KSDPSGLTGA RERCGVLTRT 200
    NYAARDYALP GAQDFPEGVA YDARKGVIYA GSAQSGTIYA VNAATGAVSK 250
    FSEGGAVGRA SALGLKVDTQ GRLWIAGGAQ GTVSVLSPDG APVAVLETPR 300
    SPNAYLNDLA PAPDGSVYVT DSTRPAIYRV TPDLRISEWL SLAGTPIRYG 350
    PGLNLNGVVA TPDGRYLLAV KLNTGDLWRI DLRSKAIRRV MGGLNNGDGL 400
    LLDGRTLYVS RNKDGIISKV TLGADYASGQ VTAEEPVTGL RFPTTLAAIG 450
    GDLIVSQGQL DKLQGGTPET PFRLTRFPKF 480
    Length:480
    Mass (Da):49,377
    Last modified:May 16, 2012 - v1
    Checksum:i2E55EE74FA7F3A5C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002192 Genomic DNA. Translation: AFD26962.1.
    RefSeqiWP_014695480.1. NC_017805.1.
    YP_006271497.1. NC_017805.1.

    Genome annotation databases

    EnsemblBacteriaiAFD26962; AFD26962; DGo_PA0076.
    GeneIDi12826745.
    KEGGidgo:DGo_PA0076.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002192 Genomic DNA. Translation: AFD26962.1 .
    RefSeqi WP_014695480.1. NC_017805.1.
    YP_006271497.1. NC_017805.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFD26962 ; AFD26962 ; DGo_PA0076 .
    GeneIDi 12826745.
    KEGGi dgo:DGo_PA0076.

    Phylogenomic databases

    KOi K04565.

    Enzyme and pathway databases

    BioCyci DGOB745776:GLCE-3135-MONOMER.

    Family and domain databases

    Gene3Di 2.120.10.30. 1 hit.
    2.130.10.10. 1 hit.
    2.60.40.200. 1 hit.
    InterProi IPR011042. 6-blade_b-propeller_TolB-like.
    IPR013658. SGL.
    IPR001424. SOD_Cu_Zn_dom.
    IPR015943. WD40/YVTN_repeat-like_dom.
    [Graphical view ]
    Pfami PF08450. SGL. 1 hit.
    PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence and transcriptome analysis of the radioresistant bacterium Deinococcus gobiensis: insights into the extreme environmental adaptations."
      Yuan M., Chen M., Zhang W., Lu W., Wang J., Yang M., Zhao P., Tang R., Li X., Hao Y., Zhou Z., Zhan Y., Yu H., Teng C., Yan Y., Ping S., Wang Y., Lin M.
      PLoS ONE 7:E34458-E34458(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0Imported and Plasmid P1Imported.

    Entry informationi

    Entry nameiH8H0U3_DEIGI
    AccessioniPrimary (citable) accession number: H8H0U3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 16, 2012
    Last sequence update: May 16, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3