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Protein
Submitted name:

E3 ubiquitin-protein ligase RNF25

Gene

RNF25

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
E3 ubiquitin-protein ligase RNF25Imported
Gene namesi
Name:RNF25Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 2

Organism-specific databases

HGNCiHGNC:14662. RNF25.

PTM / Processingi

Proteomic databases

MaxQBiH7C219.

Expressioni

Gene expression databases

BgeeiH7C219.
ExpressionAtlasiH7C219. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliH7C219.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000001557.

Family and domain databases

Gene3Di3.10.110.10. 1 hit.
InterProiIPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
SUPFAMiSSF54495. SSF54495. 1 hit.

Sequencei

Sequence statusi: Fragment.

H7C219-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AASASAAAGE EDWVLPSEVE VLESIYLDEL QVIKGNGRTS PWEIYITLHP
60 70 80 90 100
ATAEDQDSHI PMRCHRSLSE IPEDFQMNRS TRSYRCWATW PRLGWALPCC
110 120 130 140 150
MNSLRKGRKF SQITTSLMAS VSSASMVSRR RRPLPKHPVT TTSTATALLG

TSSTWSKS
Length:158
Mass (Da):17,613
Last modified:April 18, 2012 - v1
Checksum:i125CA93309BC253D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009974 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000423170; ENSP00000403582; ENSG00000163481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009974 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliH7C219.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH7C219.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000423170; ENSP00000403582; ENSG00000163481.

Organism-specific databases

HGNCiHGNC:14662. RNF25.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00390000001557.

Miscellaneous databases

NextBioi35529357.

Gene expression databases

BgeeiH7C219.
ExpressionAtlasiH7C219. baseline and differential.

Family and domain databases

Gene3Di3.10.110.10. 1 hit.
InterProiIPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
SUPFAMiSSF54495. SSF54495. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
    Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H.
    , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.
    Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH7C219_HUMAN
AccessioniPrimary (citable) accession number: H7C219
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.