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Protein
Submitted name:

Retinol-binding protein 4

Gene

Rbp4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Retinol-binding protein 4Imported
Gene namesi
Name:Rbp4Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:97879. Rbp4.

Subcellular locationi

  • Secreted SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

SecretedSAAS annotation

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiH7BWY6.
PeptideAtlasiH7BWY6.

PTM databases

SwissPalmiH7BWY6.

Expressioni

Gene expression databases

BgeeiH7BWY6.
ExpressionAtlasiH7BWY6. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025951.

Structurei

3D structure databases

ProteinModelPortaliH7BWY6.
SMRiH7BWY6. Positions 63-236.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini83 – 215133Lipocln_cytosolic_FA-bd_domInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the calycin superfamily. Lipocalin family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IJHC. Eukaryota.
ENOG4111K1Y. LUCA.
GeneTreeiENSGT00510000047107.
OMAiGHMSATA.
OrthoDBiEOG747PK3.
TreeFamiTF331445.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR002345. Lipocalin.
IPR022271. Lipocalin_ApoD.
IPR022272. Lipocalin_CS.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002449. Retinol-bd/Purpurin.
[Graphical view]
PANTHERiPTHR11873. PTHR11873. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PIRSFiPIRSF036893. Lipocalin_ApoD. 1 hit.
PIRSF500204. RBP_purpurin. 1 hit.
PRINTSiPR00179. LIPOCALIN.
PR01174. RETINOLBNDNG.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00213. LIPOCALIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H7BWY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPLGWRVWL HRDHPERSSE HRRRGTARLT EGPRVRSGGR LRGEMEWVWA
60 70 80 90 100
LVLLAALGGG SAERDCRVSS FRVKENFDKA RFSGLWYAIA KKDPEGLFLQ
110 120 130 140 150
DNIIAEFSVD EKGHMSATAK GRVRLLSNWE VCADMVGTFT DTEDPAKFKM
160 170 180 190 200
KYWGVASFLQ RGNDDHWIID TDYDTFALQY SCRLQNLDGT CADSYSFVFS
210 220 230 240
RDPNGLSPET RRLVRQRQEE LCLERQYRWI EHNGYCQSRP SRNSL
Length:245
Mass (Da):28,405
Last modified:April 18, 2012 - v1
Checksum:i25032DC8B03E69A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC101774 Genomic DNA. No translation available.
RefSeqiNP_001152959.1. NM_001159487.1.
UniGeneiMm.2605.

Genome annotation databases

EnsembliENSMUST00000025951; ENSMUSP00000025951; ENSMUSG00000024990.
GeneIDi19662.
UCSCiuc008hje.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC101774 Genomic DNA. No translation available.
RefSeqiNP_001152959.1. NM_001159487.1.
UniGeneiMm.2605.

3D structure databases

ProteinModelPortaliH7BWY6.
SMRiH7BWY6. Positions 63-236.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025951.

PTM databases

SwissPalmiH7BWY6.

Proteomic databases

PaxDbiH7BWY6.
PeptideAtlasiH7BWY6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000025951; ENSMUSP00000025951; ENSMUSG00000024990.
GeneIDi19662.
UCSCiuc008hje.2. mouse.

Organism-specific databases

CTDi5950.
MGIiMGI:97879. Rbp4.

Phylogenomic databases

eggNOGiENOG410IJHC. Eukaryota.
ENOG4111K1Y. LUCA.
GeneTreeiENSGT00510000047107.
OMAiGHMSATA.
OrthoDBiEOG747PK3.
TreeFamiTF331445.

Miscellaneous databases

ChiTaRSiRbp4. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiH7BWY6.
ExpressionAtlasiH7BWY6. baseline and differential.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR002345. Lipocalin.
IPR022271. Lipocalin_ApoD.
IPR022272. Lipocalin_CS.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002449. Retinol-bd/Purpurin.
[Graphical view]
PANTHERiPTHR11873. PTHR11873. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PIRSFiPIRSF036893. Lipocalin_ApoD. 1 hit.
PIRSF500204. RBP_purpurin. 1 hit.
PRINTSiPR00179. LIPOCALIN.
PR01174. RETINOLBNDNG.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00213. LIPOCALIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiH7BWY6_MOUSE
AccessioniPrimary (citable) accession number: H7BWY6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 6, 2016
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.