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H6UYS5 (H6UYS5_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Alpha-synuclein transcript variant 13 EMBL AFA25677.1

Alpha-synuclein transcript variant 7 EMBL AFA25671.1
Gene names
Name:SNCA EMBL AFA25674.1
OrganismHomo sapiens (Human) EMBL AFA25674.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length112 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processregulation of dopamine secretion

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6UYS5 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 16EA234777EFA89E

FASTA11211,372
        10         20         30         40         50         60 
MDVFMKGLSK AKEGVVAAAE KTKQGVAEAA GKTKEGVLYV GSKTKEGVVH GVATVAEKTK 

        70         80         90        100        110 
EQVTNVGGAV VTGVTAVAQK TVEGAGSIAA ATGFVKKDQL GKEGYQDYEP EA 

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References

[1]"SNCA transcript variants can be classified into four groups in dependence on their initial exon."
Beyer K., Munoz-Marmol A.M.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL AFA25674.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JN709861 mRNA. Translation: AFA25671.1.
JN709864 mRNA. Translation: AFA25674.1.
JN709867 mRNA. Translation: AFA25677.1.
RefSeqNP_009292.1. NM_007308.2.
UniGeneHs.21374.

3D structure databases

ProteinModelPortalH6UYS5.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEH6UYS5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6622.
KEGGhsa:6622.
UCSCuc003hso.3. human.

Organism-specific databases

CTD6622.

Phylogenomic databases

KOK04528.

Gene expression databases

ArrayExpressH6UYS5.
BgeeH6UYS5.

Family and domain databases

Gene3D1.10.287.700. 1 hit.
InterProIPR001058. Synuclein.
IPR002460. Synuclein_alpha.
[Graphical view]
PANTHERPTHR13820. PTHR13820. 1 hit.
PfamPF01387. Synuclein. 1 hit.
[Graphical view]
PRINTSPR01212. ASYNUCLEIN.
PR01211. SYNUCLEIN.
ProtoNetSearch...

Other

ChiTaRSSNCA. human.
GenomeRNAi6622.
NextBio25791.

Entry information

Entry nameH6UYS5_HUMAN
AccessionPrimary (citable) accession number: H6UYS5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.