Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

H6TFZ4

- SUS5_ORYSJ

UniProt

H6TFZ4 - SUS5_ORYSJ

Protein

Sucrose synthase 5

Gene

SUS5

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (18 Apr 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

    Catalytic activityi

    NDP-glucose + D-fructose = NDP + sucrose.

    GO - Molecular functioni

    1. sucrose synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. biosynthetic process Source: InterPro
    2. callose deposition in phloem sieve plate Source: EnsemblPlants/Gramene
    3. sucrose metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT4. Glycosyltransferase Family 4.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Sucrose synthase 5 (EC:2.4.1.13)
    Short name:
    OsSUS5
    Alternative name(s):
    Sucrose-UDP glucosyltransferase 5
    Gene namesi
    Name:SUS5
    Ordered Locus Names:Os04g0309600, LOC_Os04g24430
    ORF Names:OSJNBa0033H08.16
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Subcellular locationi

    Cytoplasm 1 Publication. Membrane 1 Publication; Peripheral membrane protein 1 Publication

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 855855Sucrose synthase 5PRO_0000418807Add
    BLAST

    Expressioni

    Tissue specificityi

    Predominantly expressed in roots, flowers and immature seeds.1 Publication

    Structurei

    3D structure databases

    ProteinModelPortaliH6TFZ4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni279 – 758480GT-B glycosyltransferaseBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0438.
    HOGENOMiHOG000240125.
    KOiK00695.
    OMAiINDREAG.

    Family and domain databases

    InterProiIPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view]
    PfamiPF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: H6TFZ4-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MASKLSFKRM DSIAETMPDA LRQSRYQMKR CFQRYVSKGK RLLKNQQLME    50
    ELEKSLDDKV EKEKLVEGFL GYIICSTQEA VVLPPFVAFA VRMNPGIWEY 100
    VKVHSDDLSV EGITPSEYLK FKETLYDEKW AKDDNSLEVD FGALDLSTPH 150
    LTLPSSIGNG LQFVSKFMSS KLGGKPESMK PLLDYLLTLN YRGEKLMIND 200
    TIDTVSKLQT ALLLAEVFVS GLPKYTPYLK FEQRFQEWGL ERGWGDTAER 250
    CKETLNCLSE VLQAPDPTNM EKFFSRVPSI FNIVIFSIHG YFGQEKVLGL 300
    PDTGGQVVYI LDQVRAMEEE LLQRIKQQGL HVTPKILVLT RLIPDAKGTK 350
    CNVELEPVEN TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYAQDSC 400
    AKILDILEGK PDLIIGNYTD GNLVASLLSN KLCVTQGTIA HALEKTKYED 450
    SDVKWREMDQ KYHFSCQFTA DMISMNTSDF IITSTYQEIA GSKEKPGQYE 500
    HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSIYFPFT QKQKRLTDLH 550
    PQIDELLYSK DDTDEHIGYL ADRNKPIIFS MARLDKVKNI TGLVEWYGQN 600
    KKLRDLVNLV VVAGLLDASQ SKDREEIEEI NKMHNLMDRY QLKGQIRWIK 650
    AQTDRVRNGE LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ 700
    GGPAEIIIDG VSGFHVNPIN DREAGIKIAD FFQKCKEDPS YWNKVSTAGL 750
    QRICECYTWK IYATRVLNMG STYSFWKTLN KEERQAKQRY LQIFYNVQYR 800
    NLAKAMARAG DQQARQTTTG VAPSEIVVRP KERKPQTRMQ RILTRLAGQK 850
    PPVSE 855
    Length:855
    Mass (Da):97,812
    Last modified:April 18, 2012 - v1
    Checksum:i4A0C5F64A0346B50
    GO
    Isoform 2 (identifier: H6TFZ4-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         589-599: Missing.

    Show »
    Length:844
    Mass (Da):96,551
    Checksum:iBDF95EFEC6F0385D
    GO

    Sequence cautioni

    The sequence CAE03984.3 differs from that shown. Reason: Erroneous gene model prediction.

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei589 – 59911Missing in isoform 2. 1 PublicationVSP_044079Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ895723 mRNA. Translation: AEX32878.1.
    AL662942 Genomic DNA. Translation: CAE03984.3. Sequence problems.
    AP008210 Genomic DNA. Translation: BAF14346.1.
    AK063304 mRNA. No translation available.
    RefSeqiNP_001052432.1. NM_001058967.1. [H6TFZ4-2]
    UniGeneiOs.48521.

    Genome annotation databases

    GeneIDi4335447.
    KEGGiosa:4335447.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ895723 mRNA. Translation: AEX32878.1 .
    AL662942 Genomic DNA. Translation: CAE03984.3 . Sequence problems.
    AP008210 Genomic DNA. Translation: BAF14346.1 .
    AK063304 mRNA. No translation available.
    RefSeqi NP_001052432.1. NM_001058967.1. [H6TFZ4-2 ]
    UniGenei Os.48521.

    3D structure databases

    ProteinModelPortali H6TFZ4.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GT4. Glycosyltransferase Family 4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4335447.
    KEGGi osa:4335447.

    Phylogenomic databases

    eggNOGi COG0438.
    HOGENOMi HOG000240125.
    KOi K00695.
    OMAi INDREAG.

    Family and domain databases

    InterProi IPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view ]
    Pfami PF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
      Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
      Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), GENE FAMILY, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
      Strain: cv. Nipponbare.
    6. "An expression analysis profile for the entire sucrose synthase gene family in rice."
      Hirose T., Scofield G.N., Terao T.
      Plant Sci. 174:534-543(2008)
      Cited for: GENE FAMILY.

    Entry informationi

    Entry nameiSUS5_ORYSJ
    AccessioniPrimary (citable) accession number: H6TFZ4
    Secondary accession number(s): Q0JE91, Q7XNQ9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 5, 2012
    Last sequence update: April 18, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3