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H6TFZ4

- SUS5_ORYSJ

UniProt

H6TFZ4 - SUS5_ORYSJ

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Protein

Sucrose synthase 5

Gene

SUS5

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

Catalytic activityi

NDP-glucose + D-fructose = NDP + sucrose.

GO - Molecular functioni

  1. sucrose synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. biosynthetic process Source: InterPro
  2. sucrose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Recommended name:
Sucrose synthase 5 (EC:2.4.1.13)
Short name:
OsSUS5
Alternative name(s):
Sucrose-UDP glucosyltransferase 5
Gene namesi
Name:SUS5
Ordered Locus Names:Os04g0309600, LOC_Os04g24430
ORF Names:OSJNBa0033H08.16
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Subcellular locationi

Cytoplasm 1 Publication. Membrane 1 Publication; Peripheral membrane protein 1 Publication

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
  2. membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 855855Sucrose synthase 5PRO_0000418807Add
BLAST

Expressioni

Tissue specificityi

Predominantly expressed in roots, flowers and immature seeds.1 Publication

Structurei

3D structure databases

ProteinModelPortaliH6TFZ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni279 – 758480GT-B glycosyltransferaseBy similarityAdd
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0438.
HOGENOMiHOG000240125.
InParanoidiH6TFZ4.
KOiK00695.
OMAiINDREAG.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view]
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: H6TFZ4) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASKLSFKRM DSIAETMPDA LRQSRYQMKR CFQRYVSKGK RLLKNQQLME
60 70 80 90 100
ELEKSLDDKV EKEKLVEGFL GYIICSTQEA VVLPPFVAFA VRMNPGIWEY
110 120 130 140 150
VKVHSDDLSV EGITPSEYLK FKETLYDEKW AKDDNSLEVD FGALDLSTPH
160 170 180 190 200
LTLPSSIGNG LQFVSKFMSS KLGGKPESMK PLLDYLLTLN YRGEKLMIND
210 220 230 240 250
TIDTVSKLQT ALLLAEVFVS GLPKYTPYLK FEQRFQEWGL ERGWGDTAER
260 270 280 290 300
CKETLNCLSE VLQAPDPTNM EKFFSRVPSI FNIVIFSIHG YFGQEKVLGL
310 320 330 340 350
PDTGGQVVYI LDQVRAMEEE LLQRIKQQGL HVTPKILVLT RLIPDAKGTK
360 370 380 390 400
CNVELEPVEN TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYAQDSC
410 420 430 440 450
AKILDILEGK PDLIIGNYTD GNLVASLLSN KLCVTQGTIA HALEKTKYED
460 470 480 490 500
SDVKWREMDQ KYHFSCQFTA DMISMNTSDF IITSTYQEIA GSKEKPGQYE
510 520 530 540 550
HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSIYFPFT QKQKRLTDLH
560 570 580 590 600
PQIDELLYSK DDTDEHIGYL ADRNKPIIFS MARLDKVKNI TGLVEWYGQN
610 620 630 640 650
KKLRDLVNLV VVAGLLDASQ SKDREEIEEI NKMHNLMDRY QLKGQIRWIK
660 670 680 690 700
AQTDRVRNGE LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ
710 720 730 740 750
GGPAEIIIDG VSGFHVNPIN DREAGIKIAD FFQKCKEDPS YWNKVSTAGL
760 770 780 790 800
QRICECYTWK IYATRVLNMG STYSFWKTLN KEERQAKQRY LQIFYNVQYR
810 820 830 840 850
NLAKAMARAG DQQARQTTTG VAPSEIVVRP KERKPQTRMQ RILTRLAGQK

PPVSE
Length:855
Mass (Da):97,812
Last modified:April 18, 2012 - v1
Checksum:i4A0C5F64A0346B50
GO
Isoform 2 (identifier: H6TFZ4-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     589-599: Missing.

Show »
Length:844
Mass (Da):96,551
Checksum:iBDF95EFEC6F0385D
GO

Sequence cautioni

The sequence CAE03984.3 differs from that shown. Reason: Erroneous gene model prediction.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei589 – 59911Missing in isoform 2. 1 PublicationVSP_044079Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ895723 mRNA. Translation: AEX32878.1.
AL662942 Genomic DNA. Translation: CAE03984.3. Sequence problems.
AP008210 Genomic DNA. Translation: BAF14346.1.
AK063304 mRNA. No translation available.
RefSeqiNP_001052432.1. NM_001058967.1. [H6TFZ4-2]
UniGeneiOs.48521.

Genome annotation databases

GeneIDi4335447.
KEGGiosa:4335447.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ895723 mRNA. Translation: AEX32878.1 .
AL662942 Genomic DNA. Translation: CAE03984.3 . Sequence problems.
AP008210 Genomic DNA. Translation: BAF14346.1 .
AK063304 mRNA. No translation available.
RefSeqi NP_001052432.1. NM_001058967.1. [H6TFZ4-2 ]
UniGenei Os.48521.

3D structure databases

ProteinModelPortali H6TFZ4.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GT4. Glycosyltransferase Family 4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4335447.
KEGGi osa:4335447.

Phylogenomic databases

eggNOGi COG0438.
HOGENOMi HOG000240125.
InParanoidi H6TFZ4.
KOi K00695.
OMAi INDREAG.

Family and domain databases

InterProi IPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view ]
Pfami PF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
    Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
    Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), GENE FAMILY, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: cv. Nipponbare.
  6. "An expression analysis profile for the entire sucrose synthase gene family in rice."
    Hirose T., Scofield G.N., Terao T.
    Plant Sci. 174:534-543(2008)
    Cited for: GENE FAMILY.

Entry informationi

Entry nameiSUS5_ORYSJ
AccessioniPrimary (citable) accession number: H6TFZ4
Secondary accession number(s): Q0JE91, Q7XNQ9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2012
Last sequence update: April 18, 2012
Last modified: October 29, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3